Desulfovibrio ferrophilus: DFE_1057
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Entry
DFE_1057 CDS
T05829
Symbol
sigA
Name
(GenBank) RNA polymerase sigma factor SigA
KO
K03086
RNA polymerase primary sigma factor
Organism
dfl
Desulfovibrio ferrophilus
Pathway
dfl02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
dfl00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
DFE_1057 (sigA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dfl03021
]
DFE_1057 (sigA)
Transcription machinery [BR:
dfl03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
DFE_1057 (sigA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r1_1
Sigma70_r4
Sigma70_r1_2
Sigma70_ner
DUF3967
KIP1
DUF5743
Exonuc_VII_L
Motif
Other DBs
NCBI-ProteinID:
BBD07783
UniProt:
A0A2Z6AX59
LinkDB
All DBs
Position
complement(1145921..1147687)
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AA seq
588 aa
AA seq
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MSNVKEVQQIKTLIAEGKKKGFLTFDEVNKALPSDINKPEQVEEIIDIFDQLNIAIVDSE
QDGKKLELVSDDSDDGDDNKLKLAETDDSPDYASRSTDPVRMYLREMGAVSLLDREGEVV
IAKKIENGELDVLYALVEVPVAIEELARVGKELKDGNIKLKDVVKTIEEDDPSEDQMNQR
ERVIHLLDEVRQVYRKKQKIYCKLDNCATLERRVYGQQKEILTFKEEIVQRLRDIKLEKT
LIDSIIETVSDYVRQMHNCQRDLSAYLLSTGKTQVETKDIFDQLDAREINPVKAADELGM
TVEEVFSFKEMISGKMEILVRLQEKCCHPVHDLEEVLWRIRRANWSASRAKQELIRANLR
LVVSIAKKYTNRGLQFLDLIQEGNIGLMKAVDKFEYQRGYKFSTYATWWIRQAITRAIAD
QARTIRIPVHMIETINKLIRTSRYLVQELGRDPTPEEIAERMDYPLEKVKKVLKIAKEPI
SLETPIGDEEDSSLGDFIEDKKATAPSEEVVNTKLGEQIATVLSDLTPREEQVLRKRFGI
GEKSDHTLEEVGKLFNVTRERIRQIEAKALRKLRHPVRSQLLRSYYEN
NT seq
1767 nt
NT seq
+upstream
nt +downstream
nt
atgagcaacgttaaggaagtccaacagattaaaaccctcatcgccgagggtaagaagaag
ggatttttgacctttgacgaggtcaataaggccctgccttcggatatcaacaaaccggag
caggtcgaagaaattatcgacatcttcgaccagttgaatattgcgatcgtggacagcgag
caggatggcaagaagcttgagcttgtaagtgatgactccgatgatggagatgataacaag
ctgaagctggctgaaaccgacgattcgcctgattacgcctcccgcagtaccgaccctgtg
cgcatgtatttgcgcgagatgggtgccgtatccttgctggaccgcgaaggcgaggttgtc
attgccaagaagattgagaacggggaactcgacgtgctctatgctctggtcgaagttccc
gtagccattgaggaactggcccgcgtgggcaaggaactcaaggatggcaacatcaagctc
aaggacgtggtcaagaccattgaggaagacgatcccagtgaagaccagatgaaccagcgc
gagcgggtcatccatttgctggatgaagttcgccaagtctatcgcaagaagcagaagatt
tactgcaagcttgataactgcgccactctggagcgccgcgtctatgggcaacaaaaggaa
atcttgaccttcaaggaagagatcgtccaacgcttgcgtgacatcaagctcgaaaagacc
cttattgattccatcatcgaaacggtgagcgattacgttcgtcagatgcataactgccag
cgcgatctctctgcctatctgctctccacgggcaaaacacaagtcgagaccaaagacatc
tttgaccagctggatgcgcgtgagatcaatcccgtgaaggctgccgatgaattgggcatg
actgtggaagaggtcttttccttcaaggaaatgatctctggcaagatggaaattctggtt
cggctgcaggaaaaatgttgccatcccgtgcatgacttggaagaggtcctgtggcgaatc
cgacgcgccaattggtctgccagtcgtgccaagcaggagctcattcgtgccaacctgcgt
ctggttgtttccattgccaagaagtacaccaaccgcggtctgcagttcctggatctgatt
caggaaggcaacatcggcctgatgaaggccgtggacaagtttgaatatcagcgcggttac
aagttctctacgtatgcaacgtggtggattcgtcaggccattacccgtgccattgccgac
caggccaggacaattcgtattcctgtgcacatgatcgaaacgatcaacaagcttatccgg
acctcgcgctatctggtgcaggagttggggcgtgacccgaccccggaagagatcgccgag
cgtatggattatccgcttgagaaggttaagaaagtcctcaagattgccaaggaacccatt
tctttggagacgcccattggcgatgaagaagattcgagcctgggcgatttcatcgaggac
aagaaggccacggctccttccgaagaagtggtcaataccaagctgggtgagcagattgcc
acggtgctgtctgacctgactcctcgtgaggagcaggttttgcgcaagcgctttggtatc
ggtgagaagagcgatcataccctcgaagaagtgggtaagctgttcaacgttactcgtgag
cgtattcgtcagatcgaggccaaagcactgcgcaagttgcgtcatcctgtgcggagccag
ttgctgcgatcatattacgagaattag
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