Desulfovibrio ferrophilus: DFE_1143
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Entry
DFE_1143 CDS
T05829
Symbol
rpoH
Name
(GenBank) RNA polymerase sigma factor
KO
K03089
RNA polymerase sigma-32 factor
Organism
dfl
Desulfovibrio ferrophilus
Brite
KEGG Orthology (KO) [BR:
dfl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dfl03021
]
DFE_1143 (rpoH)
Transcription machinery [BR:
dfl03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
DFE_1143 (rpoH)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r1_2
Sigma70_r4
Sigma70_r3
HTH_11
KORA
GntR
NirdL-like_HTH
HTH_28
FeoB_Cyto
DUF7440
Motif
Other DBs
NCBI-ProteinID:
BBD07869
UniProt:
A0A2Z6AX92
LinkDB
All DBs
Position
1237463..1238506
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AA seq
347 aa
AA seq
DB search
MNTQSSANSKPDKSPQENPETPEVLPPEDDLLLEAIAEEGIDDLPEPEDLFVLAPRTGSD
VVPKDPLQMYLREIGKFSMLKPEEEFELARRVRDEGDSDAAFRLVSSHLRLVVKIAMDFQ
RRWMQNVLDLIQEGNVGLMRAVQKFDPDKGIKFSYYAAFWIKAYILKFIMDNWRLVKIGT
TQAQRKLFYNLNKERQRLQNLGFDPNSATLAENLGVSEDVVIEMDQRLSRQDMSLNLPLG
EEGGATRMDFLPALQPGVEDTLAQDEIAETLHGHLKSIAPHLNEKELDILELRLLSDSPV
TLREIGEKYGVTRERVRQIEARLLQKLKKHLTDQIQDFSQDWINRNE
NT seq
1044 nt
NT seq
+upstream
nt +downstream
nt
atgaatacacaatcttccgcaaactcaaagcctgacaagtctccacaggagaatccagag
accccggaagtcctcccgccggaagacgatctgctgctggaagccatcgctgaagaaggc
atcgacgatctgcccgagcccgaggatctcttcgtcctcgctcctcgcaccggatcggat
gtagtccccaaggatccgttgcagatgtatctgcgcgagatcggaaaattcagcatgctg
aaacctgaagaggaattcgaactggcccgccgcgtgcgcgacgaaggcgactccgacgca
gctttccggctggtgtcatcgcacctgaggctcgtggtcaagattgccatggacttccaa
cgccgctggatgcagaacgtgctcgacctgatccaggaaggcaatgtgggtctgatgcgc
gcagtgcagaaattcgacccggacaagggcatcaagttttcctattatgccgcgttctgg
atcaaggcttatatcctcaagttcattatggataactggcggctggtcaaaatcggaacc
actcaggcccagcgcaagttattctataacttgaacaaagaacgccaacgcctgcaaaat
ctggggttcgaccccaacagtgcgaccctggccgaaaaccttggcgtctccgaggacgtg
gtcatcgagatggatcaacgcctttccaggcaggatatgtctctgaatctgccactgggc
gaggagggaggcgcaacccgcatggacttcctgcccgccctgcaacccggagtggaagac
actctggcgcaggatgaaattgccgagaccctgcacggacatttgaagtccatcgctccc
catttaaacgaaaaagaactggatattctggaactgaggcttttatccgattctcccgtg
actctgcgcgaaatcggtgaaaagtatggtgtgacccgcgagcgagtccgtcagatcgaa
gcccggcttctgcagaagctcaagaagcacctcacggatcaaattcaagacttttcacaa
gactggatcaatcgcaatgaataa
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