Desulfovibrio ferrophilus: DFE_1196
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Entry
DFE_1196 CDS
T05829
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
dfl
Desulfovibrio ferrophilus
Brite
KEGG Orthology (KO) [BR:
dfl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
dfl03016
]
DFE_1196
Enzymes [BR:
dfl01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
DFE_1196
Transfer RNA biogenesis [BR:
dfl03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
DFE_1196
Prokaryotic type
DFE_1196
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB_C
Motif
Other DBs
NCBI-ProteinID:
BBD07922
UniProt:
A0A2Z6AXD7
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All DBs
Position
1294125..1295048
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AA seq
307 aa
AA seq
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MGRSRKRSKEQLDGLLVLNKPEGPTSAGCLTMIKRGLHQGKIGHAGTLDPMATGVLLVLL
GHGTKLAPYLTEGRKTYWGELELGTVTDSYDRQGKIVEQKPFDHLPPEDVRKDVLSWMEL
STQEVPPVSAAKHQGKPLYELARTGQEVPVKVKDIEIFHAEVLEMDLPRVRFRTTVSAGT
YVRSLVHSLGIRLGCGAMLTALTREHCHPFGLDQAHDLETVLDESERFPERVISLVDALP
HWPKVVVTADQAAQVQNGTWLPVTDTTLAGVPGDKAMIIDSGNTPLALVEAKEKEGSVSW
SILRGLW
NT seq
924 nt
NT seq
+upstream
nt +downstream
nt
atgggtagaagtcgcaaacgcagcaaggaacagctggacggcctgctggttctgaacaaa
ccagaaggcccgacctcagccggttgcttgacaatgatcaagcgaggcttacatcagggc
aagattggacatgccggaaccctggatccgatggccacaggggtcctgcttgtcttgctg
ggacatggcaccaaactcgccccttacctcaccgaaggtcgcaagacctactggggagaa
ctggagttgggaacggtcactgacagctatgaccgccagggcaaaatcgtcgagcaaaag
ccgtttgaccacttgccccctgaagatgtaaggaaggacgtcctttcctggatggaactc
tccacccaggaggttccgcctgtgtctgcagccaaacatcagggcaagcccctgtatgag
ttggcgcgaactggccaggaagttcctgtaaaggtaaaggatattgaaatttttcatgcg
gaggtcctggaaatggatcttccgcgtgtgcgcttccggacaacggtgagcgccggaacc
tacgtacggtccctggtccacagcttggggattcgacttgggtgcggcgccatgctcacc
gctttgacccgggagcactgccatcccttcggactcgatcaagcccatgacctggaaacg
gtcctggacgagtccgaacggtttcccgaacgggtgatttcccttgtggacgccctacct
cactggcccaaggtggtcgtgaccgctgaccaggccgcacaggttcaaaatggaacctgg
ctgcccgtaacggacacaaccctggctggtgtaccgggagacaaggccatgatcattgac
tccggcaatacgccgctggcactggtcgaagccaaggaaaaggaaggcagcgtgtcatgg
tccatactcagggggctctggtag
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