Desulfovibrio ferrophilus: DFE_1249
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Entry
DFE_1249 CDS
T05829
Symbol
fliA
Name
(GenBank) RNA polymerase sigma factor for flagellar operon
KO
K02405
RNA polymerase sigma factor FliA
Organism
dfl
Desulfovibrio ferrophilus
Pathway
dfl02020
Two-component system
dfl02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
dfl00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
DFE_1249 (fliA)
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
DFE_1249 (fliA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dfl03021
]
DFE_1249 (fliA)
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
dfl02035
]
DFE_1249 (fliA)
Transcription machinery [BR:
dfl03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
DFE_1249 (fliA)
Bacterial motility proteins [BR:
dfl02035
]
Flagellar system
Flagellar assembly proteins
Stator
DFE_1249 (fliA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r4_2
Sigma70_r3
LexA_DNA_bind
UPF0122
CorA
PhyR_sigma-like
GerE
Motif
Other DBs
NCBI-ProteinID:
BBD07975
UniProt:
A0A2Z6AXP4
LinkDB
All DBs
Position
1349549..1350337
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AA seq
262 aa
AA seq
DB search
MATLSFSGKSSSSKTEPWKFLETGEVIWEDFSARDKDEIVRHYAPKIKILALRLKGKLPQ
QVELNELISAGSLGLIECLRKYKPELNIKFETYAENRIKGAMLDELRRMDWFSRGLRARV
RQLEDAIRTIEHRTGTTPTRDEIMEVTGLSRKDVESGLAALQNQLCLSLETIQEHFSPES
SAHHDNEPYRSAALQDVVDKIAGLIDELTLREKLVLSLYYSDELNMRETAEVMGITEGRV
SQLHSQALKKLRKKFRAAYGLE
NT seq
789 nt
NT seq
+upstream
nt +downstream
nt
atggcaacattaagtttttctggaaaaagctcctcttccaagactgagccctggaagttc
ctggagaccggagaggtcatctgggaagacttcagtgcaagggacaaggatgagatcgtc
aggcactatgcgccgaagatcaagattcttgcgctcagactcaagggaaaactgccccag
caggtagagctcaacgagctcatctctgccgggtctttggggctgatcgaatgcctgcgc
aaatacaagcccgagctgaacatcaagttcgagacctatgcggaaaaccgcatcaagggt
gccatgctggacgaactcagacgcatggactggttttctcgtgggctacgagctcgtgtc
cgccaattggaagacgccatccgaaccatcgaacaccgcacaggcacaacgcctacccgc
gacgaaatcatggaggtcactggcctctcccgcaaggatgtcgaatcgggcttggcagca
ctgcaaaatcagctctgcctgtcgctggaaaccatccaggaacatttctcgccggaatcc
agcgcccaccacgacaacgaaccataccgcagtgcggcccttcaagacgtcgttgacaaa
attgccggtttaatagacgaattgacgcttcgagagaaactggtattatctttgtactac
agtgatgagttgaacatgagggaaactgccgaagttatggggataaccgaaggcagagtg
tcacaactccactctcaagcactcaaaaaattacgcaaaaaatttagagccgcctacggc
ctcgagtaa
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