KEGG   Desulfovibrio ferrophilus: DFE_1407
Entry
DFE_1407          CDS       T05829                                 
Name
(GenBank) DNA-binding protein HU
  KO
K03530  DNA-binding protein HU-beta
Organism
dfl  Desulfovibrio ferrophilus
Brite
KEGG Orthology (KO) [BR:dfl00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:dfl03032]
    DFE_1407
   03036 Chromosome and associated proteins [BR:dfl03036]
    DFE_1407
   03400 DNA repair and recombination proteins [BR:dfl03400]
    DFE_1407
DNA replication proteins [BR:dfl03032]
 Prokaryotic type
  DNA Replication Initiation Factors
   Initiation factors (bacterial)
    DFE_1407
Chromosome and associated proteins [BR:dfl03036]
 Prokaryotic type
  Nucleoid associated proteins
   HU (heat unstable protein)
    DFE_1407
DNA repair and recombination proteins [BR:dfl03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Supressor
      DFE_1407
SSDB
Motif
Pfam: Bac_DNA_binding HU-HIG
Other DBs
NCBI-ProteinID: BBD08133
UniProt: A0A2Z6AY55
LinkDB
Position
complement(1512967..1513242)
AA seq 91 aa
MTKAGLVERIKDKAGLNTKVQAEMVLDTIVESARDALLEGDSAIFTGFGSFKVVQRAART
GRNPGTGEMIRIPECKVVKYTMGKRVKGAIC
NT seq 276 nt   +upstreamnt  +downstreamnt
atgactaaagctggacttgtcgaaaggatcaaggacaaagctggcctgaacaccaaggtc
caggccgagatggttttggatacgatcgtcgagtccgcccgtgatgctctgcttgaaggg
gacagcgcaatctttaccggctttggatctttcaaggtcgttcagcgtgcagcccgcacc
ggccggaatcccggtaccggtgagatgattcgtattcccgagtgtaaagtggtcaaatac
accatggggaaacgggtcaaaggcgctatttgctag

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