Desulfovibrio ferrophilus: DFE_2196
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Entry
DFE_2196 CDS
T05829
Name
(GenBank) putative HD superfamily hydrolase
KO
K03698
3'-5' exoribonuclease [EC:3.1.-.-]
Organism
dfl
Desulfovibrio ferrophilus
Brite
KEGG Orthology (KO) [BR:
dfl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dfl03019
]
DFE_2196
Messenger RNA biogenesis [BR:
dfl03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
DFE_2196
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HD
tRNA_anti-codon
Cas3_HD
TraI_2
Motif
Other DBs
NCBI-ProteinID:
BBD08922
UniProt:
A0A2Z6B082
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All DBs
Position
2352605..2353645
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AA seq
346 aa
AA seq
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MTQKSTFVRDLTPGQNVDEIFLLASAQQGQAKNGPFWSLTLADRSGEIPTKIFSPQAQAI
TNLAAGQFVRIRGMVGTYRDQPQVVADAATVVEPSANGLQLADFVPASERDPEDMLADLE
KLCKENIRHKPLRVLVRTVLTNKQIKARIMPAPGAISIHHAYAGGLVEHTLSVCRLCMSF
CDLYPELDRQVLLAAAVFHDLGKAWEYAQGPVREHTDEGRLLGHIQLGLNVIEPFLATAM
EKGLEPEVAMHLKHIIVSHHGELEFGSPKRPKTPEAFALHFADNLDAKLKTVAEAVEPAV
PEDETGWSPYVRSLGRFVYKPKRTPDPAAENGDDKKDEQCLLPLKA
NT seq
1041 nt
NT seq
+upstream
nt +downstream
nt
atgacgcagaaaagcaccttcgtccgagacctgacccccggacaaaacgtagatgaaata
tttcttctggcctccgcccaacagggccaggccaagaatggtccgttctggtccctgacg
ctggcggaccgttccggtgagatccccaccaagatattcagcccccaggcgcaggccatc
acgaaccttgccgccggacaatttgtccgcattcgcggcatggtgggcacctaccgcgac
cagccccaggtcgtggccgacgcggccacggtggtggagccctcagccaatggcttgcaa
ctggccgacttcgtccctgccagcgaacgcgatcccgaagacatgctcgcagacctggaa
aagctctgcaaagaaaacatccgccacaagccgctccgtgttctggtgcgcaccgtactc
accaacaaacagatcaaggcgcgcatcatgcctgcgcccggtgccatcagcatccaccac
gcctatgctggcgggttggtggaacacacactgtccgtgtgccgtctgtgcatgtcgttc
tgcgacctctatcctgaactggatcgtcaggtactgctggccgcagccgtattccatgac
ctgggcaaggcttgggaatacgcccagggaccggtacgcgaacacaccgatgaaggccgc
ttgttagggcacatccagctggggctgaacgtcatcgagccatttctcgcgacggccatg
gaaaagggactggaacccgaggtggcgatgcacttgaagcacatcatcgtcagccaccac
ggcgaacttgaattcggctcacccaagcgccccaagacccccgaggcctttgccctgcat
ttcgcggacaatctggacgccaaactgaagaccgtggccgaggccgtggaacctgccgta
cccgaagacgaaaccggctggagcccctatgtgcgctccctgggccgattcgtatacaaa
cccaagcgcacccccgaccccgccgccgaaaacggcgacgacaaaaaggacgagcaatgt
ttattacctttgaaggcatag
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