KEGG   Desulfovibrio ferrophilus: DFE_2221
Entry
DFE_2221          CDS       T05829                                 
Symbol
glyA
Name
(GenBank) serine hydroxymethyltransferase
  KO
K00600  glycine hydroxymethyltransferase [EC:2.1.2.1]
Organism
dfl  Desulfovibrio ferrophilus
Pathway
dfl00260  Glycine, serine and threonine metabolism
dfl00460  Cyanoamino acid metabolism
dfl00630  Glyoxylate and dicarboxylate metabolism
dfl00670  One carbon pool by folate
dfl00680  Methane metabolism
dfl01100  Metabolic pathways
dfl01110  Biosynthesis of secondary metabolites
dfl01120  Microbial metabolism in diverse environments
dfl01200  Carbon metabolism
dfl01230  Biosynthesis of amino acids
dfl01240  Biosynthesis of cofactors
dfl04981  Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:dfl00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00630 Glyoxylate and dicarboxylate metabolism
    DFE_2221 (glyA)
  09102 Energy metabolism
   00680 Methane metabolism
    DFE_2221 (glyA)
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    DFE_2221 (glyA)
  09106 Metabolism of other amino acids
   00460 Cyanoamino acid metabolism
    DFE_2221 (glyA)
  09108 Metabolism of cofactors and vitamins
   00670 One carbon pool by folate
    DFE_2221 (glyA)
 09150 Organismal Systems
  09154 Digestive system
   04981 Folate transport and metabolism
    DFE_2221 (glyA)
Enzymes [BR:dfl01000]
 2. Transferases
  2.1  Transferring one-carbon groups
   2.1.2  Hydroxymethyl-, formyl- and related transferases
    2.1.2.1  glycine hydroxymethyltransferase
     DFE_2221 (glyA)
SSDB
Motif
Pfam: SHMT Aminotran_1_2 Beta_elim_lyase DegT_DnrJ_EryC1 Cys_Met_Meta_PP Aminotran_5
Other DBs
NCBI-ProteinID: BBD08947
UniProt: A0A2Z6B090
LinkDB
Position
2375861..2377099
AA seq 412 aa
MEELLLQDREVAKAMNLEIERQMENVELIASENFTSAAVRQTMGSVLTHKYAEGYSGKRY
YGGCEYVDIVEDLACDRAKELFGCAYANVQPHSGSSANMAAYFAACQPGDTVLAMDLCHG
GHLTHGSPVNFSGKLYNIVPYGVSKDTGLIDYEELERLAKECKPKMIIAGATVYPRIIDF
ARFRAIADEVGAILMVDMAHIAGLIAAGEHPTPIGHAHITTTTTHKTLRGPRGGMILAEE
DLGKKLNSQIFPGMQGGPLMHVIAAKAVAFGEALRPEFKTYQKQVIANCKALAAPIKNAG
FDLVSGGTDNHLILVDLTSKGITGKDAQIGLDKAGITVNKNTVPFDTQSPFVTSGIRLGS
PAMTTRGFTEPGMEKIAAWIVDALGSLDNDTRLKEIKAEVAAFARQFPLFAW
NT seq 1239 nt   +upstreamnt  +downstreamnt
atggaagaattgctccttcaagatcgcgaagtcgccaaggcaatgaacctggaaatcgag
cgtcagatggaaaacgtcgagctcatcgcctcggaaaacttcacatctgccgctgtgcgc
cagaccatgggcagcgtgctgacccacaaatacgccgaaggctactccggcaagcgctac
tacggcggttgcgagtatgttgacatagtcgaggatcttgcctgcgaccgtgccaaggaa
ctgttcggctgcgcgtacgccaacgtccagccccattcgggttccagcgccaacatggcg
gcctacttcgctgcatgccaacccggtgacaccgtgctggccatggacctctgccacggc
ggtcacctgacccacggcagccccgtaaacttctcgggcaagctgtacaacatcgtgccc
tacggcgtgtccaaggacaccgggctcatcgactacgaagagctggaacgcctggccaag
gaatgcaagcccaagatgatcatcgccggtgccaccgtgtacccgcgcatcatcgacttc
gctcgcttccgcgccattgccgatgaagtcggcgccatcctgatggtggacatggcccac
atcgcagggctgatcgccgcaggtgagcacccgacccccatcgggcatgcacacatcacc
accacgaccacgcacaagactctgcgcggcccccgcggcggcatgatcctggccgaagag
gacctgggcaagaaactcaattcccagatcttccccggcatgcagggcggcccgctgatg
cacgtcatcgctgccaaggccgtggcctttggcgaggctctgcgtcctgaattcaagacc
tatcagaagcaggtcattgccaactgcaaggccctggccgcacccatcaagaacgccggg
ttcgacctggtctccggcggcacggacaaccacctgatcctcgtcgatctgacctccaag
ggcatcaccggcaaggatgcccagatcggtctggacaaagcaggcatcaccgtaaacaag
aacaccgtgccctttgacacccagtccccgttcgtgacctcgggcatccgcctgggctcc
ccggccatgaccacccgcggcttcaccgagcccggcatggaaaagatcgccgcctggatc
gtggatgcactgggatctctggacaacgacaccagactcaaggaaatcaaggccgaagtg
gctgcctttgcgcgccagttccccctgtttgcctggtag

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