Desulfovibrio ferrophilus: DFE_2221
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Entry
DFE_2221 CDS
T05829
Symbol
glyA
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
dfl
Desulfovibrio ferrophilus
Pathway
dfl00260
Glycine, serine and threonine metabolism
dfl00460
Cyanoamino acid metabolism
dfl00630
Glyoxylate and dicarboxylate metabolism
dfl00670
One carbon pool by folate
dfl00680
Methane metabolism
dfl01100
Metabolic pathways
dfl01110
Biosynthesis of secondary metabolites
dfl01120
Microbial metabolism in diverse environments
dfl01200
Carbon metabolism
dfl01230
Biosynthesis of amino acids
dfl01240
Biosynthesis of cofactors
dfl04981
Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:
dfl00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
DFE_2221 (glyA)
09102 Energy metabolism
00680 Methane metabolism
DFE_2221 (glyA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
DFE_2221 (glyA)
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
DFE_2221 (glyA)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
DFE_2221 (glyA)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
DFE_2221 (glyA)
Enzymes [BR:
dfl01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
DFE_2221 (glyA)
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GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
DegT_DnrJ_EryC1
Cys_Met_Meta_PP
Aminotran_5
Motif
Other DBs
NCBI-ProteinID:
BBD08947
UniProt:
A0A2Z6B090
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All DBs
Position
2375861..2377099
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AA seq
412 aa
AA seq
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MEELLLQDREVAKAMNLEIERQMENVELIASENFTSAAVRQTMGSVLTHKYAEGYSGKRY
YGGCEYVDIVEDLACDRAKELFGCAYANVQPHSGSSANMAAYFAACQPGDTVLAMDLCHG
GHLTHGSPVNFSGKLYNIVPYGVSKDTGLIDYEELERLAKECKPKMIIAGATVYPRIIDF
ARFRAIADEVGAILMVDMAHIAGLIAAGEHPTPIGHAHITTTTTHKTLRGPRGGMILAEE
DLGKKLNSQIFPGMQGGPLMHVIAAKAVAFGEALRPEFKTYQKQVIANCKALAAPIKNAG
FDLVSGGTDNHLILVDLTSKGITGKDAQIGLDKAGITVNKNTVPFDTQSPFVTSGIRLGS
PAMTTRGFTEPGMEKIAAWIVDALGSLDNDTRLKEIKAEVAAFARQFPLFAW
NT seq
1239 nt
NT seq
+upstream
nt +downstream
nt
atggaagaattgctccttcaagatcgcgaagtcgccaaggcaatgaacctggaaatcgag
cgtcagatggaaaacgtcgagctcatcgcctcggaaaacttcacatctgccgctgtgcgc
cagaccatgggcagcgtgctgacccacaaatacgccgaaggctactccggcaagcgctac
tacggcggttgcgagtatgttgacatagtcgaggatcttgcctgcgaccgtgccaaggaa
ctgttcggctgcgcgtacgccaacgtccagccccattcgggttccagcgccaacatggcg
gcctacttcgctgcatgccaacccggtgacaccgtgctggccatggacctctgccacggc
ggtcacctgacccacggcagccccgtaaacttctcgggcaagctgtacaacatcgtgccc
tacggcgtgtccaaggacaccgggctcatcgactacgaagagctggaacgcctggccaag
gaatgcaagcccaagatgatcatcgccggtgccaccgtgtacccgcgcatcatcgacttc
gctcgcttccgcgccattgccgatgaagtcggcgccatcctgatggtggacatggcccac
atcgcagggctgatcgccgcaggtgagcacccgacccccatcgggcatgcacacatcacc
accacgaccacgcacaagactctgcgcggcccccgcggcggcatgatcctggccgaagag
gacctgggcaagaaactcaattcccagatcttccccggcatgcagggcggcccgctgatg
cacgtcatcgctgccaaggccgtggcctttggcgaggctctgcgtcctgaattcaagacc
tatcagaagcaggtcattgccaactgcaaggccctggccgcacccatcaagaacgccggg
ttcgacctggtctccggcggcacggacaaccacctgatcctcgtcgatctgacctccaag
ggcatcaccggcaaggatgcccagatcggtctggacaaagcaggcatcaccgtaaacaag
aacaccgtgccctttgacacccagtccccgttcgtgacctcgggcatccgcctgggctcc
ccggccatgaccacccgcggcttcaccgagcccggcatggaaaagatcgccgcctggatc
gtggatgcactgggatctctggacaacgacaccagactcaaggaaatcaaggccgaagtg
gctgcctttgcgcgccagttccccctgtttgcctggtag
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