Desulfovibrio ferrophilus: DFE_2560
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Entry
DFE_2560 CDS
T05829
Symbol
serS
Name
(GenBank) seryl-tRNA synthetase
KO
K01875
seryl-tRNA synthetase [EC:
6.1.1.11
]
Organism
dfl
Desulfovibrio ferrophilus
Pathway
dfl00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
dfl00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
DFE_2560 (serS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
dfl01007
]
DFE_2560 (serS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
dfl03016
]
DFE_2560 (serS)
Enzymes [BR:
dfl01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.11 serine---tRNA ligase
DFE_2560 (serS)
Amino acid related enzymes [BR:
dfl01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
DFE_2560 (serS)
Transfer RNA biogenesis [BR:
dfl03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
DFE_2560 (serS)
Prokaryotic type
DFE_2560 (serS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2b
Seryl_tRNA_N
Motif
Other DBs
NCBI-ProteinID:
BBD09286
UniProt:
A0A2Z6B1L3
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All DBs
Position
complement(2766577..2767854)
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AA seq
425 aa
AA seq
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MLDLKFIRKNLDVVRESVARRRAKVDVDAFTGLDERRRALIAEAEVLKAERNTVSKDIGK
RKKAGEDAADLVSRMGEVGDRIKSLDEELRQVDAEVRDWLESVPNIPHESVVDGNDDADN
PEVFRWGAKPEFDFTPKEHYELGANLDGLDFERGAKLAGSRFVVYRGWAARLERALASFM
LDVQTLEHGYKEIMPPVIVNTETMTATGQLPKFAEDLFKLEGTDYYLIPTAEVPVTNLHR
EETIAEDELPLKYTAWTPCFRSEAGSYGKDTKGLIRMHQFQKVEMVRFEKPEDSFAALEE
MREHAENILKKLGLHYRVVTLCTGDLGFSATKTYDLEVWLPGQDKFREISSCSNCMDFQA
RRGGIRFKRKGAKKAELVHTLNGSGLAVGRTLVAVLENYQQADGSIVIPEVLRPYMGGLE
VLKSE
NT seq
1278 nt
NT seq
+upstream
nt +downstream
nt
atgctcgatctcaagtttatcagaaagaatctggatgtggtccgtgaatccgtggcccgc
cgccgcgccaaggtggacgtggatgcctttaccggtctggacgaacgccgccgtgcgctc
attgccgaagccgaggtcctgaaggccgagcgtaataccgtgtccaaggacatcggcaag
cgcaagaaagccggcgaggacgcggccgatctggtgtcccgcatgggcgaggtgggcgac
cgtatcaagtctctggatgaggagctgcgtcaggtggacgccgaggtccgcgactggttg
gagtccgtgcccaatattccgcacgagagtgtggtggatggcaatgacgacgctgataat
cccgaggtcttccgctggggcgcgaagcccgaattcgatttcacgcccaaggagcattac
gaactgggcgccaatctggacgggctggacttcgaacgcggagccaaattggcagggagc
cggtttgtggtctatcgcggctgggccgctcgtctggagcgcgccctggcatccttcatg
ctggatgtgcagacccttgagcacggctacaaggagatcatgcccccggtcatcgtcaat
accgagaccatgaccgccacgggccagttgcccaagtttgccgaagacctgttcaagctc
gagggcacagattattacctgatccccaccgccgaggtgccggtgaccaacctgcaccgt
gaggagaccattgccgaggatgagctgccgctgaagtacacggcctggactccgtgcttc
cgctccgaggccggctcctatggcaaggacaccaagggcctgattcgtatgcatcagttc
cagaaggtggagatggtgcgcttcgaaaagcccgaggattcttttgccgcgctggaagag
atgcgtgaacacgccgagaatattctgaagaagctgggcctgcattaccgggtcgtgacc
ctgtgcaccggcgatctgggtttctctgccaccaagacctacgatctggaagtctggctg
cccggtcaggacaagttccgtgagatttcgtcctgctccaactgcatggatttccaggcc
aggcgaggtggtattcgtttcaagcgcaagggcgccaaaaaggccgagctggtgcatacc
ctgaacggctccgggctggccgtgggccggactctggttgccgtgctggagaactatcag
caggccgatggcagtatcgtcattcccgaggttctgcggccctacatgggcggacttgag
gttttgaaatcagaatag
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