Desulfovibrio ferrophilus: DFE_2608
Help
Entry
DFE_2608 CDS
T05829
Name
(GenBank) transglycosylase, Slt family
KO
K18691
peptidoglycan lytic transglycosylase F [EC:
4.2.2.29
]
Organism
dfl
Desulfovibrio ferrophilus
Brite
KEGG Orthology (KO) [BR:
dfl00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
dfl01011
]
DFE_2608
Enzymes [BR:
dfl01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
DFE_2608
Peptidoglycan biosynthesis and degradation proteins [BR:
dfl01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
DFE_2608
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SLT
SBP_bac_3
SLT_4
Nudc_N
SLT_2
LysR_substrate
Motif
Other DBs
NCBI-ProteinID:
BBD09334
UniProt:
A0A2Z6B1G8
LinkDB
All DBs
Position
2817928..2819367
Genome browser
AA seq
479 aa
AA seq
DB search
METILKKYAKPWELVVLTVSLLVLVELVFVMQLQAGHFAGDPVLRVAAPENEWLAGELTP
HGIGFEKELLDKFCNQNNLRWTWIRTKNWAEAWEQVRKGRADIVIGLGTEPPTSLEVKVT
AGPSYARTRPVLVHNNKRLGVSKDCDIFDRPVLVTADTGMTDSLRQKADELDCTSRTVSS
ADMSMTPLLDTLSRNQARFALVDERRFALWQPFYRKIKAAKTLDRELDYRWYWSERSSIL
AGSLQHFWTEIQANGQLANLYDKYFGFLPEETDYFELYHLIKTVEEKLPRYRKAILKAAE
RTGVDPLLLVAVIYQESRFESAARSKTGVRGLMQITTATARTLGVNRMDPFESISGGSRY
LQRLYNGLDDMGLDTDTRWLFALASYNRGPGHLRDATDLAKRLGGTGKSWRELKTVFPKL
CYERYYKDSRYGYTKGYEVVHYVERIRYYHYILHGLVILSRPEAQELTALVSASSGSVL
NT seq
1440 nt
NT seq
+upstream
nt +downstream
nt
atggaaactattctgaaaaaatacgcaaaaccctgggagctggtcgttctgaccgtctcc
ctgctggtgctggtcgaactggtcttcgtcatgcaattgcaggcaggccactttgccggt
gaccccgtgctgcgcgttgccgctcccgagaatgagtggcttgctggcgaactgaccccc
cacggcatcggcttcgaaaaagagctgcttgataaattctgtaaccagaacaatctgcgc
tggacctggattcgaaccaaaaactgggccgaggcctgggaacaggttcgcaagggccgc
gccgatatcgtcatcggcctgggcaccgagcctccgacatccctggaagtcaaggtcacc
gcaggcccgtcctatgcccgcacccgcccggtgctggtgcataacaacaagcgcctgggc
gtcagcaaggactgcgacatctttgatcgccccgtgctggtcacggccgataccggcatg
accgacagcctgcgccagaaagccgatgaactggactgcacctcacgcaccgtctccagc
gccgacatgagcatgaccccgctgctggacaccctgagccgcaatcaggcgcgctttgcc
ctggtggacgaacgtcgcttcgccctctggcagcccttctatcgcaagatcaaggccgcc
aagaccctggacagggaactggactaccgctggtactggagcgaacgctcctccatcctt
gccgggtccctgcagcacttctggacggagattcaggccaatggccagttggcaaacctc
tatgacaaatatttcggtttcctgcctgaagagaccgattatttcgaactctatcacctg
atcaagaccgtggaagaaaagctgccccgctaccgcaaggccatcctgaaggccgcggaa
cgcacaggggtggacccgctgctgctggtggcggtcatctatcaggagtcccgcttcgag
tccgctgcccggtccaagaccggtgtgcgcgggctgatgcagatcaccacagccacggcc
aggaccctgggcgtgaaccgcatggaccccttcgagagcatcagcggcggcagccgttat
ctccaacgcctgtacaacgggctggacgacatggggctggatacggacactcgctggctg
ttcgccctggcaagctacaaccgtggccccgggcacctgcgcgacgccaccgaccttgcc
aaacgcctgggtggcactggcaagtcatggcgcgagttgaaaacggtgttccccaagctg
tgctacgagcgttattacaaggactccagatacggctacaccaagggctatgaagtggtg
cactacgtggagcgcatccgctactaccattatatcctacacggactcgtcatcctctcg
cgaccggaagcgcaggagcttaccgcgcttgtcagcgcctccagcggctccgttctctga
DBGET
integrated database retrieval system