Desulfovibrio ferrophilus: DFE_2896
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Entry
DFE_2896 CDS
T05829
Symbol
truA
Name
(GenBank) tRNA pseudouridine synthase A
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
dfl
Desulfovibrio ferrophilus
Brite
KEGG Orthology (KO) [BR:
dfl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
dfl03016
]
DFE_2896 (truA)
Enzymes [BR:
dfl01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
DFE_2896 (truA)
Transfer RNA biogenesis [BR:
dfl03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
DFE_2896 (truA)
Prokaryotic type
DFE_2896 (truA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
Motif
Other DBs
NCBI-ProteinID:
BBD09622
UniProt:
A0A2Z6B289
LinkDB
All DBs
Position
complement(3160985..3161737)
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AA seq
250 aa
AA seq
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MPRLKLILAYDGTNFNGWQIQAGSTQRTVQGSLEKALSKICNQHIRAHGSGRTDTGVHAL
GQVVHADIPDNRVDAPWQRALNALLPADISVLHASLAPQDFHVRFDALSKTYTYSLWPEN
RYDIPQRRNFVWATGALDLEAMDRAARLMVGQYDCKCFQNTGTPVDNTVRTVTLVAREPG
QFPGEVCYRFEADGFLKQMVRNMVGLLVWIGRGRFSPEDVPTIIAGQDRTVAFPTAPPQG
LTLVAVHYPA
NT seq
753 nt
NT seq
+upstream
nt +downstream
nt
atgccgcgcctgaaactgatcctggcctatgacgggaccaacttcaacggctggcagatt
caggccgggagcacgcagcgtacggtacagggcagcctggaaaaagccctctcaaagatc
tgcaaccaacatatccgggcccatggctcgggtcgcacggacaccggggtgcacgccctg
gggcaggtcgttcacgccgacatcccggacaaccgcgtggatgctccctggcaacgggca
ctcaacgcgctgttgcccgctgatatttccgttctgcacgcaagccttgccccgcaagac
tttcacgtcagattcgatgccctttccaaaacctacacctatagtttatggcccgagaac
cgatacgatataccgcaaaggcggaatttcgtatgggcgactggagcgcttgatttggag
gccatggacagagccgcccggctgatggtcgggcagtatgactgcaaatgcttccagaat
acaggcactccagtggacaacaccgtgcgcaccgtgacccttgtggcgcgggagccgggg
cagttccccggcgaggtgtgctatcgcttcgaggccgacggcttcttgaagcagatggtg
cgcaacatggtcggtctgctcgtatggatcggacgtggacgcttcagcccggaggacgtg
cccacaatcatcgcggggcaggatcgcacggtggcgttccccacggcaccaccacaggga
ctgaccctggtggcggtgcactacccggcctga
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