Desulfovibrio ferrophilus: DFE_2997
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Entry
DFE_2997 CDS
T05829
Name
(GenBank) putative DNA polymerase III, delta prime subunit
KO
K02341
DNA polymerase III subunit delta' [EC:
2.7.7.7
]
Organism
dfl
Desulfovibrio ferrophilus
Pathway
dfl03030
DNA replication
dfl03430
Mismatch repair
dfl03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
dfl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
DFE_2997
03430 Mismatch repair
DFE_2997
03440 Homologous recombination
DFE_2997
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
dfl03032
]
DFE_2997
03400 DNA repair and recombination proteins [BR:
dfl03400
]
DFE_2997
Enzymes [BR:
dfl01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
DFE_2997
DNA replication proteins [BR:
dfl03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
DFE_2997
DNA repair and recombination proteins [BR:
dfl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
DFE_2997
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
SgrR_N
Motif
Other DBs
NCBI-ProteinID:
BBD09723
UniProt:
A0A2Z6B2N7
LinkDB
All DBs
Position
complement(3254259..3255092)
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AA seq
277 aa
AA seq
DB search
MNIPNNQIRIKDLMDRLADDPPQVLLLEGGTVDEREALALYWATRLNCHCEGSACGDCVV
CKQIHDRVHADLRICDGREAKIKIDDVRELKHLFGQPPRGDGKRVVIFNEAQELTQQAAN
ALLKSLEEPSQGTVFLLLTPQREWLLPTLVSRSWVLTLAWPSETRTPEDIREWQKALMAF
WRTGKGWFKRTSAKGAVDKDIAMSVVLACQHEVARTLIGKGGSDMSDGFAKVRPASLKKI
DLALAHAQDTLSIPTPVNPALVLDWLATRIYGVIREK
NT seq
834 nt
NT seq
+upstream
nt +downstream
nt
atgaacatcccgaacaatcaaatacgaatcaaggatctcatggatcgtctggcggacgac
ccgccgcaggtgttgctgctcgagggcggcaccgtggacgaacgcgaggccctggccctg
tattgggcaacgcgcctgaactgccactgcgaaggctcggcctgtggagactgcgtggtc
tgcaagcagatccacgaccgtgtgcatgcggacctgcgcatctgcgatggacgcgaggcc
aagataaaaatcgacgatgtccgggaattgaagcatctgttcggtcagcccccgcgcggc
gacggcaagcgcgtggtgatcttcaacgaggctcaggaactgacccagcaggcggcaaac
gcgctcttgaaatccctggaggagccgagccagggtacggtttttctgcttctgaccccg
caacgcgaatggctgctgcccacgcttgtctcgcgcagttgggtgctgaccctggcctgg
cccagcgaaacacgcacccccgaggatatccgcgagtggcaaaaggcgctgatggccttc
tggcgcacgggcaagggctggttcaagcgcaccagcgccaagggagccgtggataaggac
atcgccatgagcgtggtcctggcctgccaacacgaagtggcccgaaccctgatcggcaag
ggcggctcggacatgagcgacgggtttgccaaggtccgccccgcgtccctgaaaaagatc
gatctggccctggcccatgcgcaggacaccctgtccatccccacgccggtcaacccggcc
ctggtactggattggctggccacccgcatctacggcgtgatccgggaaaaataa
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