Desulfovibrio ferrophilus: DFE_3264
Help
Entry
DFE_3264 CDS
T05829
Name
(GenBank) DNA/RNA helicase, superfamily I
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
dfl
Desulfovibrio ferrophilus
Pathway
dfl03420
Nucleotide excision repair
dfl03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
dfl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
DFE_3264
03430 Mismatch repair
DFE_3264
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dfl03400
]
DFE_3264
Enzymes [BR:
dfl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
DFE_3264
DNA repair and recombination proteins [BR:
dfl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
DFE_3264
MMR (mismatch excision repair)
Other MMR factors
DFE_3264
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
Viral_helicase1
AAA_30
AAA_12
PcrA_UvrD_tudor
Motif
Other DBs
NCBI-ProteinID:
BBD09990
UniProt:
A0A2Z6B3K3
LinkDB
All DBs
Position
complement(3548846..3550942)
Genome browser
AA seq
698 aa
AA seq
DB search
MLVIAGAGSGKTRTIVYRLAHLVRNGVAPENILLLTFTRKAAQEMQDRAELLLEGGLAGV
TGGTFHAFAFSMLRRFPGALDEAGRVSIMDQGDAENALRDIKSDLGMGKGDRSFPKKSTL
MGLISKSRNKELALSAVLQNEAFHMLRYEGEIEQLAKAYAVFKKRHGLYDYDDLLFGLER
LLRDHEPARDFARSRFKYVMVDEFQDTNLVQARIVKLLGGKSGNVMAVGDDAQSIYAFRG
ANVHNILSFEQMFDGAKLIRLEQNYRSTQPILDLTNALLEQAELKIRKNLFTERKDSHKP
QMVRTISDRSQAQAVVSKVLEFGRKFPLHEVAVLFRAGYQSYSLEVALNKLGIRFQKFGG
IRFTEAAHIRDALSFLRLMQNPSDIPAWQRVFDHVKGVGPKTCAKIFAAVMDGDKKYLTA
SCKRNPQVNEVLDFLDGLRTQDQRPSPLLGRVLEFYQPILEKKFADDYPRRQSGLEQLQR
IAAGYENLDGFLGDISLENPEPEKDTGKEDTLVLSTVHSAKGLEWSAVVIIDLVQDRFPS
RHALQRAEDLEEERRLLYVACTRAKDRLALFVPSVIYNQYNGTSEPALESPFLSELPLST
YEAWRENYSGGLARVDGGTTRTPEAPASSVQSSTAKHSSKGAGTGPTATGNGPTQLGYCR
HKIFGRGKVIATVGEGKFRINFPGFGLKVILADYLEME
NT seq
2097 nt
NT seq
+upstream
nt +downstream
nt
gtgctcgtcatcgctggtgcaggctcgggcaagacccgaaccatcgtctaccgcctggcg
cacctggtacgaaacggcgtggccccggaaaacattctgctgctgaccttcacccgcaag
gccgcgcaggagatgcaggaccgggccgagctgctgctcgaaggcgggctggccggagta
acggggggcaccttccatgcttttgccttctccatgctgcgccgtttcccgggagccttg
gacgaagccggtcgtgtatccatcatggatcagggagatgccgaaaatgccctgcgcgac
atcaaaagtgatctcggcatgggcaaaggcgatcgatctttcccaaaaaaatcaacgctc
atgggcctgatcagcaagtcccgaaataaagagttggccctcagtgcggtgctgcagaac
gaggccttccacatgctgcgctacgagggcgagatcgagcaactggccaaggcctacgcc
gtcttcaaaaaacgccatggactctacgactacgacgacctgctcttcgggttggagcgc
ctgcttcgtgaccacgaaccggcacgcgactttgcccgcagccgcttcaaatacgtcatg
gtggacgaattccaggacaccaacctcgtgcaggcgcgcatcgtcaaactgctgggtgga
aaaagcggaaatgtgatggccgtgggcgatgatgcccagtccatctatgcctttcgcgga
gccaacgtgcataacatcctgtccttcgagcagatgttcgacggtgcaaaactgatccgc
ctggaacagaactaccgctcgacccagcccattctggacctgaccaacgccctgctggag
caggcagagttgaaaatcaggaaaaacctgtttaccgaacgcaaggacagccacaagcct
cagatggtgcgcaccatctcggatcgatcccaggcccaggccgtggtttcaaaagttctg
gagttcgggcgcaagtttcccttgcacgaagtcgcagtgctcttccgtgcggggtaccag
tcctactcccttgaagtcgcactgaacaaactcggcatccgcttccagaagttcggcggc
atccgcttcaccgaggccgcgcacattcgcgatgccctgagtttcctgcggctgatgcag
aacccctcagacatccctgcatggcaacgcgttttcgatcatgtaaaaggggttggcccc
aagacctgcgccaagatcttcgcagctgtcatggacggtgacaaaaaatatcttacggct
tcctgcaaacgcaacccgcaagtcaacgaagtgctggattttctggacggattgcgcact
caggaccagcggccttccccgctgcttggcagggtattggaattctaccaacccattctg
gaaaagaaattcgcggacgactatccccgccgtcaatccggcctggaacagttgcagcgc
attgccgcaggctacgagaacctggacggattcctgggtgatatctcactggagaacccg
gaaccggagaaagacacaggcaaagaggatacgctggtgctgtccaccgtgcactcggcc
aaaggtttggaatggtcggccgtagtcatcatcgacctggtgcaggaccgctttccctcc
cgccacgcattgcaacgcgccgaggatctggaagaggaacgccgcctgctctacgtcgcc
tgcacccgcgccaaagacaggctggccctgttcgtccctagcgtaatttacaatcaatac
aacggtacaagtgagcccgccctggaaagccccttcctgtccgagttgcccctgagcacc
tacgaggcctggcgcgaaaactactcgggtggcctggccagggtggacggtggcaccacg
cgcacgcctgaggcacctgcatcgtcggtgcaatcctccacagccaagcactcctcaaaa
ggggcaggcactggcccaaccgccacaggaaacggcccgactcaactcggatattgccga
cacaagatttttggacgcggcaaggtcatcgccaccgtgggtgaggggaaatttcgcatc
aatttcccggggttcggcctcaaagtaatcctagcggattacctcgaaatggaatag
DBGET
integrated database retrieval system
