Dorea formicigenerans: NQ560_01440
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Entry
NQ560_01440 CDS
T08666
Name
(GenBank) HD domain-containing protein
KO
K03698
3'-5' exoribonuclease [EC:3.1.-.-]
Organism
dfm
Dorea formicigenerans
Brite
KEGG Orthology (KO) [BR:
dfm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dfm03019
]
NQ560_01440
Messenger RNA biogenesis [BR:
dfm03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
NQ560_01440
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HD
tRNA_anti-codon
Cas3_HD
HDOD
TraI_2
Motif
Other DBs
NCBI-ProteinID:
UWP20139
LinkDB
All DBs
Position
271493..272434
Genome browser
AA seq
313 aa
AA seq
DB search
MRYIDTLVEGETIRNIYLCKGKRSAETRNGKPYDNLILQDKTGTLDGKVWDPNSNGIADY
DEKDFIEVFGDVISYNNNLQLNIRQIRKAQEGEYIPADYMPSTEKSVDGMYEELLSYGRQ
ISNPYLRRVIEYYFEKDEKFIRTFKGHSAAKSVHHGFAGGLLEHTLSVVKFCEYMVGQYD
ILNKDLLYTAAMCHDIGKTIELSPFPENDYTDDGQLLGHIIIGIEMIDDAIREIPEFPKQ
LASELKHCIVAHHGELEYGSPKKPALAEAMALNLADNADAKMQTLKEIFKDKKAGEWLGY
NRLFESNLRKTTI
NT seq
942 nt
NT seq
+upstream
nt +downstream
nt
atgagatatattgatactcttgtagaaggagaaacaattcgaaatatatatttatgtaaa
ggaaagagatccgcagagacgcggaatggaaagccgtatgacaatctgatacttcaggat
aagacaggaactctggacggaaaagtctgggatccgaattccaatggaattgctgattat
gatgagaaagatttcattgaagtattcggagatgtcatcagttataataacaatcttcaa
ttgaacatccgccagatcagaaaagcacaggaaggcgaatacatacctgcagattatatg
ccttcgacagaaaaaagcgtagatgggatgtacgaagaactgctttcctacggaagacag
atcagcaatccgtatctgcgtagagtgattgagtattattttgaaaaagacgagaaattc
attcgcacattcaaaggacattccgcagcaaagagtgtacaccacggatttgccggagga
ctcttggagcacacattgagtgttgtgaaattctgcgagtatatggttggacagtatgat
attctcaacaaagacctgctttacacagcagctatgtgccacgatatcggaaagacaatt
gagttgtcaccattcccggaaaatgattacacagacgatggacagcttcttggtcatatc
attatcggaatcgagatgatcgatgatgcaatccgcgagattccagaattcccaaaacag
cttgcaagtgagctgaaacactgcatcgtggcacatcatggagagttagaatacggttcc
ccgaaaaaaccggcactggcagaagccatggcactaaatcttgccgacaacgcagacgcc
aagatgcagacattaaaagaaatattcaaagacaaaaaagccggagagtggcttggatat
aacagattgttcgagtcaaacttaagaaaaacaacaatatag
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