Dorea formicigenerans: NQ560_02415
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Entry
NQ560_02415 CDS
T08666
Name
(GenBank) ribonuclease Z
KO
K00784
ribonuclease Z [EC:
3.1.26.11
]
Organism
dfm
Dorea formicigenerans
Brite
KEGG Orthology (KO) [BR:
dfm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
dfm03016
]
NQ560_02415
Enzymes [BR:
dfm01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.11 tRNase Z
NQ560_02415
Transfer RNA biogenesis [BR:
dfm03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
NQ560_02415
Prokaryotic type
NQ560_02415
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lactamase_B_2
Lactamase_B
Anti-Pycsar_Apyc1
Lactamase_B_4
Motif
Other DBs
NCBI-ProteinID:
UWP20327
LinkDB
All DBs
Position
475361..476269
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AA seq
302 aa
AA seq
DB search
MLDVCLLGTGGMMPLPYRWLTSLLVRYNGSSLLIDCGEGTQIAIKEKGWSFKPIDVICFT
HYHGDHISGLPGLLLTMGNADRTEPLTLIGPKGLERVVNSLRVIAPELPFQIKYIEITQP
EQIFEMNGYRLKAFRVNHNVTCYGYTMEIDRAGKFDVDRANEAAIPQKFWGSLQKGENVQ
DGDNLYTPDMVLGPARKGIKLTYCTDTRPTDSIRNNAKGSDLFICEGMYGEKDKLKKAKE
YKHMTFYEAAQLAKEAEVAEMWLTHYSPSLTHPEEYMDEVKKIFPNSIAAKDKRTVELTF
SD
NT seq
909 nt
NT seq
+upstream
nt +downstream
nt
atgttagacgtatgtttgttgggaacgggcggcatgatgcccctcccgtaccgctggctc
acctcgcttctggtgagatataacggcagcagtcttctaattgactgcggagaaggtacg
cagattgcaataaaagaaaaaggctggagtttcaaacccatcgatgtgatttgcttcaca
cattaccacggcgaccacatcagcggactcccaggcctgctcctgactatgggaaatgca
gaccgcacggaaccgttgactctgattggaccgaaaggactggagcgggtagtcaactca
cttcgcgttattgcgccggaactgccatttcagataaaatacatcgaaatcacacagccg
gagcagatatttgagatgaatggctatcgcctgaaagcatttcgcgtaaatcataacgtc
acttgctatggctacacgatggaaatcgaccgcgccgggaagttcgacgtggatcgtgca
aatgaagcggcaattccgcagaagttctggggcagtctgcaaaaaggtgaaaatgtccag
gacggagacaatttatacacaccggacatggttcttggacctgcgcgaaaaggaattaaa
ctgacatactgcacagacacgagaccgacggactctatccgcaacaacgcgaaaggttcc
gatctatttatctgcgaaggaatgtacggtgagaaggataagctgaaaaaagcaaaagaa
tacaagcatatgacattttacgaggcagcgcagcttgcaaaagaagcagaagtcgcagaa
atgtggctgacgcattatagtccgtcgctgacgcacccggaagaatatatggacgaggtg
aagaaaatcttcccgaattccatagcagcaaaagataaacgaacggtagaactgacattt
tcagattaa
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