Dorea formicigenerans: NQ560_02775
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Entry
NQ560_02775 CDS
T08666
Symbol
truA
Name
(GenBank) tRNA pseudouridine(38-40) synthase TruA
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
dfm
Dorea formicigenerans
Brite
KEGG Orthology (KO) [BR:
dfm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
dfm03016
]
NQ560_02775 (truA)
Enzymes [BR:
dfm01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
NQ560_02775 (truA)
Transfer RNA biogenesis [BR:
dfm03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
NQ560_02775 (truA)
Prokaryotic type
NQ560_02775 (truA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
DUF2344
C2_Mug190_3rd
FlaA
Motif
Other DBs
NCBI-ProteinID:
UWP20386
LinkDB
All DBs
Position
550725..551525
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AA seq
266 aa
AA seq
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MRRIRIVVAYDGTNYCGWQIQPNGITIEEILNRQISKLTGEDIRIIGASRTDSGVHALGN
VAVFDTESRIPGDRFAYALNQKMPEDIVIVRSDEVQIDWHPRYQNEISKTYEYHIYNAKV
RNPLKNRYSTFVSFDLDVEKMRQGAKYILGEHDFASFCNVRTNAKDTVRTVHEITIKEIP
MDKFQASNWGQENSNLENEKEIVIRVTGNGFLYNMVRIIAGTLIRVGRGFYEPEKIRDIL
EAKEHTSEGITAPPNGLVLVSIDYPL
NT seq
801 nt
NT seq
+upstream
nt +downstream
nt
gtgagaagaattcggatagtagttgcctatgacggtaccaattactgtggctggcagatt
cagccgaacggtattacaatagaagaaatcctaaatagacagatcagtaaactgaccgga
gaagatatccggatcataggtgcaagccggacagattccggagtacatgcacttggaaat
gtagccgtttttgatacagaatcccggattccgggagaccggttcgcatacgcactgaat
cagaagatgccggaagatattgtgatcgtaagatctgacgaagtgcagatagattggcat
ccgagatatcagaacgagatatccaaaacatatgaatatcacatttataacgcgaaggtg
agaaatccgctgaaaaaccggtacagcaccttcgtttctttcgatttagatgtggaaaag
atgagacaaggtgcgaaatacattttaggggagcatgattttgcaagcttctgcaatgta
cggactaatgcgaaagataccgtgcgtacagtgcatgaaataacaattaaagagattcca
atggataagttccaggcttcgaattggggacaggaaaattcaaatttagaaaatgaaaaa
gaaatcgttattcgtgtaacgggaaacggcttcctatataatatggttcgtatcattgcc
ggaacgttgatccgtgtggggcgtggattctatgaaccagagaaaatcagagatattctg
gaggcgaaggaacatacttccgagggaataacagcaccgccgaatggactggtgcttgta
tcaatagattatccactgtaa
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