Dorea formicigenerans: NQ560_04960
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Entry
NQ560_04960 CDS
T08666
Symbol
pcrA
Name
(GenBank) DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
dfm
Dorea formicigenerans
Pathway
dfm03420
Nucleotide excision repair
dfm03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
dfm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
NQ560_04960 (pcrA)
03430 Mismatch repair
NQ560_04960 (pcrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dfm03400
]
NQ560_04960 (pcrA)
Enzymes [BR:
dfm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
NQ560_04960 (pcrA)
DNA repair and recombination proteins [BR:
dfm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
NQ560_04960 (pcrA)
MMR (mismatch excision repair)
Other MMR factors
NQ560_04960 (pcrA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
AAA_30
AAA_11
ResIII
MSSS
Baseplate_N
Motif
Other DBs
NCBI-ProteinID:
UWP21349
LinkDB
All DBs
Position
982470..984728
Genome browser
AA seq
752 aa
AA seq
DB search
MNIYDTLNDKQKEAVFHTEGPLLILAGAGSGKTRVLTHRIAYLIEEKGVNPWNILAITFT
NKAAAEMRERVDNLVGFGSESIWVSTFHSMCVRILRRHIALLGYDTNFTIYDTDDQKTLM
RDVCKLLQIDTKIYKERMLIGTISHAKNEMLTPEEFRLQAGGDFHQKKIADVYEEYEKQL
RANNALDFDDLLLKTVQLFQTQHDVLEYYQERFRYIMVDEYQDTNGVQFELVRLLASRYQ
NLCVVGDDDQSIYKFRGADIRNILDFEKVFTKAAVIKLEQNYRSTANILNAANAVISHNH
GRKDKTLWTDNEDGDKIAFRQFDTAFDEAEYIVSDIKEHVEKGECDYQDNAILYRTNAQS
RMFEEKFVTANIPYKIIGGINFYARREIKDILAYLKTVDNGQDDLAVRRIINVPKRGIGL
TSINRVQEYAAMHEKGIYECLKGADLIPDIGRGVSKLESFVALIEHFKVDAKELTLHELM
QEIIDETGYIESIQAESEIEAQARIENIDELLNKVVAYEEVCEEHDEPVTLSGFLEEVAL
VADIDNLDENSDYVVLMTLHSAKGLEFPRVYLAGMEDGLFPSYMTVTADDPDELEEERRL
CYVGITRAQSELTMTCARRRMVRGETQYNKMSRFLKEVPLELISTGNKFSGNGKSLTDHA
DHEETERKTDYQMARQAFKTKAFAAVQQGKSFGKPAGGKLEYGVGDRVRHIKFGEGTVLS
IVEGGRDYEVTVNFDGPGTKKMFAAFAKLQKI
NT seq
2259 nt
NT seq
+upstream
nt +downstream
nt
ttgaatatatatgatacgttaaatgataaacagaaggaagcagtctttcacacggaagga
ccgcttcttattttagcaggagcgggatcaggtaagacaagagtcctgacccacaggatt
gcgtacctgattgaagaaaaaggcgtcaatccatggaatattttggcaattacattcacg
aacaaagcggcagcagagatgcgggaacgtgtggataatctggttgggttcggctcagaa
agtatttgggtgagtacattccattctatgtgtgtgcggatactaagacgccatattgca
ttgcttggatatgacacgaattttacaatttatgatacagatgatcagaagacactgatg
agggatgtgtgcaagttgttacagattgacacaaaaatctacaaagagcgtatgctgatc
ggaaccatttctcatgcaaaaaatgagatgttgactccggaagaatttcggcttcaggcg
ggcggagattttcatcagaaaaagattgcggatgtgtatgaagagtatgaaaagcagctc
cgagctaacaatgcactggattttgatgatttgcttttaaagacagttcagctattccag
acacagcacgatgtgttggaatattatcaggagagattccgctatattatggtagatgag
taccaggatacgaacggggtgcagtttgagttggtacgtctgcttgcttccaggtatcag
aatctgtgtgtagtcggagatgatgatcagtctatttataaattccgtggggcagatatc
cgtaatattctggattttgagaaagtatttacaaaggcagcagtcattaaattggagcag
aattatcgctccacagcaaatatcctgaatgcagcaaatgctgtgatcagccacaatcac
ggaagaaaggacaagacgctgtggacagacaatgaagatggtgataagattgcatttcgt
cagtttgatactgcattcgatgaggcagaatacatagtatccgatataaaagaacatgtg
gaaaagggcgagtgcgactatcaggacaacgccattttatatcgtacgaatgcacagtcc
cgtatgttcgaggaaaaatttgtaacagcaaatattccatataagattattggcggcatt
aatttctatgcaagacgggaaattaaagatattcttgcatatttaaaaaccgtagataat
ggtcaggatgacctggcggtgcgaagaattatcaatgtaccaaaaagaggaatcggtctt
accagcattaatcgtgtgcaggagtatgctgcgatgcatgaaaaaggaatttatgaatgt
cttaagggagctgaccttatcccggatatcggaagaggcgtgtcaaagctcgagtcattt
gtagcattgatcgagcactttaaagtagatgcaaaggaattgacacttcatgaactgatg
caggaaattattgacgaaaccggatatatcgagagcattcaggcagagagtgagatagag
gctcaggcgagaattgaaaatatcgatgagcttttaaataaagtcgttgcttatgaagaa
gtatgcgaagagcatgatgaaccggtaacactgagtggatttcttgaggaagtcgctctg
gtggcagatattgacaatctggatgagaacagtgattatgtggtgctcatgactttacac
agtgcgaaaggactagaatttccacgcgtctatcttgccggaatggaagacggactgttc
ccgagctatatgacagtaacagctgatgatccggacgaactggaggaagagcgaagactt
tgttatgtaggtattacaagagcccagagcgaactgactatgacttgtgcaagaagacgt
atggtccgcggtgagacgcagtataataaaatgtcacgttttttaaaggaagttccgctg
gaactgatatctacgggaaataaattttcaggaaatggaaaaagtctcacagaccacgcg
gatcatgaagaaacggaaagaaaaacggactaccagatggcgagacaggcatttaagacg
aaagcatttgcagcagtacagcagggaaaatcctttggaaagcctgcagggggaaagctg
gagtatggagtcggtgaccgtgtacgccatataaaatttggtgaaggtacagttttgtcg
atagtcgaaggcggacgtgactacgaagtgacggtaaattttgacgggcctggaacgaag
aagatgtttgcggcattcgcaaaattacagaagatataa
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