Dorea formicigenerans: NQ560_05605
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Entry
NQ560_05605 CDS
T08666
Symbol
uvrA
Name
(GenBank) excinuclease ABC subunit UvrA
KO
K03701
excinuclease ABC subunit A
Organism
dfm
Dorea formicigenerans
Pathway
dfm03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
dfm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
NQ560_05605 (uvrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dfm03400
]
NQ560_05605 (uvrA)
DNA repair and recombination proteins [BR:
dfm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
NQ560_05605 (uvrA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
NQ560_05605 (uvrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrA_inter
UvrA_DNA-bind
ABC_tran
SMC_N
AAA_29
AAA_16
AAA_21
nSTAND1
RsgA_GTPase
AAA_33
BCA_ABC_TP_C
AAA_25
DUF7575
DnaJ_CXXCXGXG
cobW
Viral_helicase1
Motif
Other DBs
NCBI-ProteinID:
UWP20891
LinkDB
All DBs
Position
1121583..1124426
Genome browser
AA seq
947 aa
AA seq
DB search
MAVKNEKKQYIKIRGANEHNLKNIDLDIPRNELVVLTGLSGSGKSSLAFDTIYAEGQRRY
MESLSSYARQFLGQMEKPDVESIEGLSPAISIDQKSTNRNPRSTVGTVTEIYDYFRLLYA
RIGIPHCPKCGREIKKQTVDQMVDQIMELPERTKIQLLAPVVRGRKGRHEKLLERAKKSG
YVRVRVDGNLYELSEEIALDKNIKHNIEIIVDRLVVKPGIEKRLTDSIENVLHLAEGLMI
VDIIDGEPMNFSQSFSCPDCGISIDEIEPRSFSFNNPFGACPECFGLGYKMEFDEDLMIP
DKRLSISEGAITVMGWQSCTDKKSFTYAILDALSKEYDFSLDTPFQDYPQEIHDVIIHGT
NGREVKVHYKGQRGEGVYDVAFEGLIRNVERRYRETSSETMKAEYEEFMRITPCRKCGGQ
RLKAEALAVTVGGKNIAEVTEMSIENLQTFMGSLELTQQQKMIGGQILKEIQARIKFLMD
VGLDYLTLARATGTLSGGEAQRIRLATQIGSGLVGVAYILDEPSIGLHQRDNDKLLGTLK
HLRDLGNSVIVVEHDEDTMRAADYIVDIGPGAGEHGGEVIACGTAEQIMKNKKSITGAYL
SGRMQIPVPEHRADPSGWIKIRGARENNLKNVDVEIPLGVMTCVTGVSGSGKSSLVNEIL
YKRLARDLNRARVIPGKHNAIDGLEQLDKVIAIDQSPIGRTPRSNPATYTGVFDLIRDLF
ASTADAKARGYKKGRFSFNVKGGRCEACAGDGILKIEMHFLPDVYVPCEVCHGKRYNRET
LEVKYKGKSIYDVLNMTVEEALHFFENVPSIRRKMETLYDVGLSYIRLGQPSTQLSGGEA
QRIKLATELSRRSTGKTIYILDEPTTGLHFADVHKLTEILHRLSADGNTVVVIEHNLDVI
KTADYIIDMGPEGGDKGGTVIAKGTPEEVAESPVSYTGKYIKPMLEK
NT seq
2844 nt
NT seq
+upstream
nt +downstream
nt
atggcagtaaaaaatgaaaaaaaacaatatattaaaatacgaggtgccaatgagcataat
ttgaaaaatatagacttggatattccaagaaatgaactggtagttcttaccggacttagc
ggttcaggaaagtcctctctggcgttcgataccatttatgcggaaggacaaaggagatat
atggagtctctgtcttcttatgcaagacagttcctggggcagatggagaaaccggatgtg
gagagtattgaaggactttctccggcaatttccattgaccagaaatccacgaaccgcaat
ccaagatctacagtaggaacagtgacggagatctatgattattttcgtctgttatatgcg
agaatcggaattccacattgtccgaaatgtggccgtgagattaagaaacagacggtagat
cagatggtagatcagatcatggaactgccggagcgcacgaagatccagctccttgctcca
gttgtccgtggaagaaaaggacgccatgaaaagcttctggagagagcgaagaaaagcgga
tatgtacgtgtgcgtgtggacggtaatctgtatgaattatccgaagagatcgcattagat
aagaacatcaagcataatatagaaattatcgtggatcgacttgtggtgaagccgggaatt
gagaagcgtctgacggattcgattgaaaatgtactacatctggcagaggggctgatgatt
gttgacattattgacggggagccgatgaatttcagccagagcttttcctgcccggactgt
ggaatcagtatcgatgagatagagccgcgaagcttctctttcaacaatccatttggcgca
tgcccggagtgtttcggacttggatataagatggaatttgatgaggatctgatgatcccg
gataagagactgagcatcagcgaaggagcgattaccgtaatgggatggcagtcttgtacg
gataagaagagttttacctatgcgattcttgacgcgctcagtaaagaatatgatttttct
ctggacacgccatttcaggactatccacaggaaatccatgatgtgatcatccacggaacg
aatggacgtgaggtgaaagttcattataaaggccagcgcggagaaggtgtctatgatgtt
gcatttgaaggactgatccgcaatgtggaacgcagataccgggagacttcatctgagaca
atgaaggcagaatatgaagagtttatgagaatcactccgtgtagaaaatgtggcggccag
cgactgaaggcggaagcgcttgcagtgacggtcggtggtaaaaatatcgcagaagtgacg
gagatgtccattgaaaacctgcaaacatttatgggtagtctggagcttacgcagcagcag
aagatgatcggaggacaaatcttaaaagagatccaggcaagaattaagtttttgatggat
gtaggtctggattacctgactctcgcccgtgctaccggaacattatccggaggagaagcg
cagagaatccgtcttgcgacacagattggttcaggtctggtgggagtggcttatattctg
gacgagccgagtatcggcctgcaccagagggataatgacaaactgctcggaacactgaag
catctgcgtgatctcgggaattctgtcattgtcgtggaacatgatgaggatacgatgcgt
gcggcagactatattgtggacattggacctggtgccggtgagcatggaggagaagtaatt
gcatgtggaaccgcagagcagattatgaagaataaaaaatccatcacaggggcttacctt
agtggaagaatgcagattccggtaccggagcaccgcgcggatccgtcaggctggattaag
atcagaggagcaagggagaataacttaaaaaatgtggatgtagagatcccgcttggtgtg
atgacctgtgtgacaggtgtgtctggatctggaaagagttcgcttgtaaatgaaatcttg
tacaaacgtcttgcaagagatctgaacagagcaagagtgattccgggaaaacataatgcc
attgatggtctggagcagctggataaagttattgccattgaccagtcaccgattggaaga
acaccaagatcaaacccggcaacctatacgggagtatttgatctcatccgtgaccttttt
gcatctacagcagacgcaaaagcacgtgggtacaagaaaggaagattcagtttcaatgtg
aaaggcggacgttgtgaagcctgtgccggagacggaatcctgaaaatcgagatgcatttc
ctgccggatgtttatgtaccttgcgaggtttgccacggaaagaggtataaccgggagacg
ctggaggtaaaatacaaaggaaagagtatttatgatgtactcaatatgaccgtggaagag
gcattgcatttctttgaaaatgtaccaagtatccgaagaaagatggagacactttatgat
gtaggactttcctatatccgtctcggtcagccttccacacagctttccggaggagaggca
cagcggattaagctggcgacagaactgagtcggagaagtacgggaaagaccatctatata
ttagatgaacctacgacaggattacattttgcagatgtgcataaactgacagagattctg
catagattatcagcggacggcaatacagtcgtagtcattgagcataatctggatgtgatc
aagacagcagattatattattgatatgggaccggaaggcggtgacaaaggcggaaccgtt
attgcaaagggaacgccggaagaagtggctgaaagtccggtatcatacaccggaaaatat
atcaagccgatgcttgaaaaataa
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