Dorea formicigenerans: NQ560_05830
Help
Entry
NQ560_05830 CDS
T08666
Symbol
rfbC
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
dfm
Dorea formicigenerans
Pathway
dfm00521
Streptomycin biosynthesis
dfm00523
Polyketide sugar unit biosynthesis
dfm00541
Biosynthesis of various nucleotide sugars
dfm01100
Metabolic pathways
dfm01110
Biosynthesis of secondary metabolites
dfm01250
Biosynthesis of nucleotide sugars
Module
dfm_M00793
dTDP-L-rhamnose biosynthesis, glucose-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
dfm00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
NQ560_05830 (rfbC)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
NQ560_05830 (rfbC)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
NQ560_05830 (rfbC)
Enzymes [BR:
dfm01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
NQ560_05830 (rfbC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
dTDP_sugar_isom
Motif
Other DBs
NCBI-ProteinID:
UWP20934
LinkDB
All DBs
Position
1176050..1176658
Genome browser
AA seq
202 aa
AA seq
DB search
MGQIKVEKNAGGIKGLCVIEPTVHGDARGYFMETYNQKDMEEAGLTMQFVQDNQSCSTKG
VLRGLHFQKEFPQGKLVRVVKGSVFDVAVDLRSDSETYGKWFGVELTEENKKQFYIPEGF
AHGFLVLSEIAEFCYKCTDFYHPGDEGGLAWNDPEIGVEWPQLVGEYKGNASAEGYHLED
GTALNLSDKDQLWVGLKDTFHF
NT seq
609 nt
NT seq
+upstream
nt +downstream
nt
atgggacagattaaagtagaaaaaaatgcaggtggaataaagggactttgtgtcattgag
ccaacggttcatggtgatgcaagaggatactttatggagacatacaatcagaaggatatg
gaagaggcaggacttacgatgcagttcgtacaggacaatcagtcttgttctacaaaaggt
gttcttcgcggattacatttccagaaagaattcccgcagggaaaacttgtacgtgtcgta
aaaggttcagtatttgacgtagctgttgatcttagaagtgacagtgagacatacggaaaa
tggttcggtgtagagctgacagaagagaacaagaaacagttctatattccggaaggattt
gctcatggattccttgttttaagtgagattgcagagttctgctacaagtgtacagacttc
tatcatccaggagatgaaggtggtctcgcatggaacgaccctgagattggtgtagaatgg
ccacagcttgtaggggagtataagggcaatgcttccgcagaaggatatcatctagaagat
ggaacagcactgaacttaagtgataaagatcagctctgggtaggactgaaagatacattt
catttttaa
DBGET
integrated database retrieval system
