Dorea formicigenerans: NQ560_06010
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Entry
NQ560_06010 CDS
T08666
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
dfm
Dorea formicigenerans
Brite
KEGG Orthology (KO) [BR:
dfm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
dfm03032
]
NQ560_06010 (topA)
03400 DNA repair and recombination proteins [BR:
dfm03400
]
NQ560_06010 (topA)
Enzymes [BR:
dfm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
NQ560_06010 (topA)
DNA replication proteins [BR:
dfm03032
]
Prokaryotic type
DNA Topoisomerases
NQ560_06010 (topA)
DNA repair and recombination proteins [BR:
dfm03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
NQ560_06010 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_Top1
Toprim
Toprim_4
Zn_ribbon_recom
Zn_ribbon_3
Zn_ribbon_GRF_2
HypA
zf-tcix
Motif
Other DBs
NCBI-ProteinID:
UWP20969
LinkDB
All DBs
Position
1216556..1218637
Genome browser
AA seq
693 aa
AA seq
DB search
MARYLVIVESPAKVKTIKKFLGSNYVVAASNGHVRDLPKSQLGVDVENDYEPKYITIRGK
GEILANLRKEVKKADKVYLATDPDREGEAISWHLSKALKLEDKKVYRISFNEITKNAVKA
SLKNPRDIDMDLVDAQQARRVLDRVVGYRISPLLWAKVKRGLSAGRVQSVALRIIADREA
EIDAFIPEEYWTLDAELNVKGERKPLIAKFYGTEKEKMTIESKEHLNKILKELDGADYEV
SEIKKGERTKKAPVPFTTSTLQQEASKALNFATSKTMRIAQQLYEGVDVKGSGTVGIITY
LRTDSTRISEEADANVRSYIGEQYGSQYVAAEGTRKSGSQKIQDAHEAIRPTDVTRTPAM
LKDSLSRDQFRLYQLIWKRFVASRMMPAVYETTSVKIAAGKYRFNVATSKIAFEGFRLIY
TEAGEEKDEKGVLLKGLDENSELSLEQFDSKQHFTQPPAHYTEASLVKTLEELGIGRPST
YAPTITLIINRRYVAKENKNLYMTELGEVVNNIMMHSFPSIVDVSFTANMESLLDGVAEG
KVRWKTIIENFYPDLDAAVKKAEEELEEVKIEDEVTDVICEECGRNMVIKYGPHGKFLAC
PGFPECRNTKPYLEKIGVKCPMCGKDVVIRKTKKGRRYYGCENNPECEFMSWQKPSEKKC
PQCGNYMVEKGNKLLCSNEQCGYTESIKKEKEN
NT seq
2082 nt
NT seq
+upstream
nt +downstream
nt
atggcacgatatctcgtgatagtggagtcaccggcaaaggtgaaaacaatcaaaaagttt
ctgggaagtaattatgtggtggctgcgtcaaatggacatgtcagagatcttccgaaaagt
cagcttggtgtagatgtggagaatgactacgaaccgaagtatattacgatacgtggaaaa
ggtgagatccttgcaaatctcagaaaagaagtgaaaaaagcagataaagtttatctcgca
actgacccggaccgcgaaggagaggcgatttcctggcatctgagtaaagcattgaaactg
gaggataagaaagtttatcgtattagcttcaatgaaatcaccaagaatgcggtgaaggca
tctcttaagaacccgcgggatatcgatatggatctggtggatgcacagcaggcgagacgt
gtgctggaccgtgtggttggataccgcatcagtcccctcctctgggccaaagtaaagaga
ggtttaagtgccggtcgtgtgcagtctgtagcgcttcgcattatagcagatcgtgaggcg
gaaatcgatgcatttattccagaggaatactggactctggatgcagagctgaacgtaaaa
ggtgagagaaagcctctgatcgcgaagttctacggaacagagaaagagaagatgacgatt
gagtcgaaagaacacttgaataagattttaaaggagcttgatggtgcggactatgaagtg
agtgaaatcaaaaaaggagagcgtacaaaaaaggcaccggtcccatttacgacaagtaca
ctgcagcaggaagcttccaaagctttgaattttgcaacctccaagacgatgcgtattgcg
cagcagctttatgaaggagttgatgtcaagggaagtggaaccgtgggtattatcacatat
cttcgtacggattctacccgtatttccgaagaggcagatgcgaatgtaagaagctatatt
ggagagcagtatggcagtcagtatgtggcagcagaaggcaccaggaaaagtggcagtcag
aagattcaggatgctcatgaggcaattcgtccgacggatgttacccgcactccggctatg
ttgaaggattccttgtcccgtgaccagttccgcctgtatcagctgatctggaaacgtttt
gttgcaagccgtatgatgcctgcagtttatgagaccacttctgtaaaaatcgcagcagga
aaatatcgtttcaatgttgcaacatcaaagattgcatttgaaggattccgtctgatctat
acggaggcgggagaagaaaaagacgagaagggtgtgcttttaaagggactggatgagaac
agtgaactttctctggaacagtttgacagtaagcagcattttacacagccgccggcacac
tacacagaggcgtctcttgtaaagactttggaggagctgggaatcggacgcccaagtact
tatgcaccgacaattacattgattataaatagaagatacgttgcgaaggaaaataaaaac
ctttatatgacagaacttggagaagttgttaataatataatgatgcattcattcccaagt
attgtggatgtcagttttacagcaaatatggaaagtcttctggacggtgttgcggaagga
aaagtcagatggaagacgattattgaaaatttctatccggatttggacgcagccgtgaaa
aaagcggaagaagaactggaagaggtaaaaatcgaggacgaagtaacggatgtaatctgt
gaagaatgtggcagaaacatggttatcaaatacggtccgcatggaaaattcctggcatgt
ccgggattcccggaatgtcggaatacaaagccgtatctggaaaagattggtgtaaaatgt
ccgatgtgcggaaaagatgtagtaattcgcaaaacgaagaagggaagacgctattacggt
tgtgaaaataatccggaatgtgagttcatgtcctggcaaaaaccgtctgaaaagaagtgc
cctcagtgtggaaattatatggtagaaaaaggaaataaacttctttgcagcaatgaacaa
tgtggttacactgaaagtataaaaaaagagaaagaaaattaa
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