Dorea formicigenerans: NQ560_06140
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Entry
NQ560_06140 CDS
T08666
Name
(GenBank) penicillin-binding transpeptidase domain-containing protein
KO
K08384
stage V sporulation protein D (sporulation-specific penicillin-binding protein)
Organism
dfm
Dorea formicigenerans
Pathway
dfm00550
Peptidoglycan biosynthesis
dfm01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
dfm00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
NQ560_06140
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
dfm01011
]
NQ560_06140
Peptidoglycan biosynthesis and degradation proteins [BR:
dfm01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
NQ560_06140
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Motif
Pfam:
Transpeptidase
PBP_dimer
CBL
Motif
Other DBs
NCBI-ProteinID:
UWP20992
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Position
1239646..1241379
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AA seq
577 aa
AA seq
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MRNKTYNKRKIMIVFLAALLMILGLIGRMVYLMVFDAEYYQKKAEDLHERERKIKAARGE
IIDTNGTVLATNRTVCTISVIHSQIKEPEVVIKKLSKCLGMEEAEVRKRVEKVSSMERIK
TNVDKETGDKIREMELAGVKVDEDFKRYYPYNELASKVIGFTGGDNQGIIGLEVRYEDYL
KGSNGRILTTTDARGIELEGVAEDRVEPVAGKTLQISMDYNIQMYAQQMAEKVMEEKQAD
KVAILLMNPQNGEILAMVNVPEFDLNEPFTLNQDQEISEKSKEDLNQMWRNGCINDTYEP
GSTFKIITASACLEERVVSLSDTFSCPGYRIVEDRKIRCHKVGGHGAETFVQGIQNSCNP
VFIDIGLRLGTGRFCDYFEQFGLLGKTGVDLPGEAATIMHKEENIGQVELATMSFGQSFQ
VTPIQMAATVSALVNGGKRVTPHFGVRILDKDKETVRELKYDDGKQIVSEETSRTMQALL
ESVVSEGSGKNAKIEGYHIGGKTATSQTLPRSANKYISSFIGFAPAANPQILGMCVIYNP
QGVYYGGTIAAPVIRDIFDNIFPYLGIEKDVEMQYTN
NT seq
1734 nt
NT seq
+upstream
nt +downstream
nt
ttgagaaataaaacatataataaaaggaaaattatgattgtgtttttagcggcacttttg
atgattttgggtctgataggacgaatggtctatctgatggtttttgatgcggagtattat
cagaaaaaggcggaagatcttcacgagcgggaacgaaagattaaggcagccagaggagaa
attatcgatacgaatggtacagtgctggcaacaaaccggacggtgtgtacaatttcggtc
atacatagccagattaaggaaccagaggtggtgataaaaaaactgagcaaatgtctgggc
atggaggaagcggaagttagaaagcgggtggagaaggtgtcttccatggaacggattaag
acgaatgttgataaggagacaggggataagatacgggaaatggaacttgccggagtgaaa
gtggatgaagattttaaacggtactatccgtataatgagcttgcttcgaaggtgattgga
tttaccggtggtgataatcagggaatcattggactggaagtgagatacgaagattaccta
aaggggagtaacggcaggattctgacaacgacagatgcaagaggtattgaactggagggt
gtagctgaagaccgggtagaaccggtggcaggcaagacacttcaaatcagtatggactat
aatattcagatgtacgcccaacagatggcagaaaaagtcatggaagaaaaacaggcggat
aaggttgcgattcttcttatgaatccacaaaacggagaaatccttgccatggtaaatgta
ccggaatttgatctgaacgaaccatttacgttgaatcaggatcaggaaatttcagaaaaa
tcaaaagaagatttgaatcagatgtggagaaatggatgcatcaatgatacatatgagccg
ggttccacttttaaaattattacagcgtcagcctgtctggaagaaagggtggtatctctt
tcagatacattttcctgtccgggctaccggatcgtggaagaccggaaaatccggtgtcac
aaagtagggggacatggagctgaaacatttgtacaagggatacagaattcctgtaatccg
gtatttattgacattggactgagattgggaacaggacgattctgtgattattttgaacag
ttcgggcttcttgggaagacgggagtagatcttccgggggaagcagcaacgattatgcat
aaggaagaaaatattggtcaggtggagcttgcgaccatgagtttcggtcagtcctttcaa
gtgacaccgattcagatggcagcgaccgtgagtgctctggtcaatgggggaaagcgcgtg
acaccacattttggagtccggatactggacaaagataaagagacagtacgggaattaaaa
tatgacgatggaaagcaaatcgtgtcggaagaaacttccaggacaatgcaggcattgctg
gaaagtgttgtgtcagagggatccgggaaaaatgcaaagatcgaaggataccatattggt
ggaaagacagctacgtctcagacacttccaagaagtgcgaataagtatatttcttctttt
atagggtttgcaccggctgccaatccgcagattctcggcatgtgtgtcatttataaccca
cagggtgtatactacggggggaccatcgcagctccggtgatccgggatatatttgacaac
atattcccgtatcttggcattgaaaaagacgtcgaaatgcagtatactaactaa
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