Dorea formicigenerans: NQ560_08785
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Entry
NQ560_08785 CDS
T08666
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
dfm
Dorea formicigenerans
Brite
KEGG Orthology (KO) [BR:
dfm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
dfm03009
]
NQ560_08785 (rimO)
Enzymes [BR:
dfm01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
NQ560_08785 (rimO)
Ribosome biogenesis [BR:
dfm03009
]
Prokaryotic type
ribosomal protein modification factors
NQ560_08785 (rimO)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM_2
TRAM
TMF_TATA_bd
CCDC22_CC
DUF5005
DUF3107
Motif
Other DBs
NCBI-ProteinID:
UWP18608
LinkDB
All DBs
Position
complement(1785742..1787064)
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AA seq
440 aa
AA seq
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MNILFISLGCDKNLVDSEVMLGLLDKKGYQIVDSEEDADIIVVNTCCFIHDAKEESIQTI
LEMAEYKKEGKLKALIVTGCLAQRYQQEIIDEIPEVDAVLGTTSYDHIVEAVEEALAGNG
HVVLEDVDALPDVKEKRLVTTGGHYAYMKIAEGCDKHCTYCIIPKLRGNYRSVPMEKLLA
EAKDLADQGVKELILVAQETTVYGKDLYGEKSLHKLLRELCKISGIQWIRILYCYPEEIY
DELIQTIKEENKVCHYLDLPIQHASDAVLKRMGRRTSKAQLVEIIEKLRKEIPDISLRTT
LITGFPGETQEQHEELKDFVDEMEFDRLGVFTYSPEEDTPAATMTEQIPEEVKEDRQAEL
MELQQEIAFDLAEDMVGREVLVMIEGKVADENAYVGRTYKDAPNVDGLIFINTDEELMSG
DFARVRVTGALEYDLIGELI
NT seq
1323 nt
NT seq
+upstream
nt +downstream
nt
atgaatattttatttatatccctcggctgcgataagaacctggtggattcagaggtcatg
cttgggcttttggataaaaagggatatcagatcgtagattcagaagaagacgcagatatt
attgttgttaatacctgctgttttattcatgatgcaaaggaggaaagtattcagaccatt
cttgagatggcagagtacaaaaaagaagggaagctgaaagctctgatcgtgaccgggtgc
ctggcacagcgctatcagcaggagattattgacgagataccggaagttgatgcagtactt
ggaactacttcttatgatcatatcgtagaagcggtggaagaggctcttgcgggaaatgga
catgttgttctggaagatgtggatgcacttccagatgtaaaagaaaagagacttgtaaca
acaggcgggcattatgcatacatgaaaattgccgaaggctgcgacaagcattgtacttac
tgtatcatcccaaaacttcgtggtaattaccgcagtgttccgatggagaagctgctggca
gaagcgaaagacctggctgatcagggagtaaaagaattgattcttgttgcacaggaaacg
accgtatacggaaaggatttatatggagagaaatctttgcataaattgctccgcgagctt
tgtaaaatatccggaatccagtggatccgaattctttattgttatccggaggagatttac
gatgaactgattcagacgattaaagaagaaaataaagtctgtcactatctggatcttccg
attcaacatgcaagtgacgcagtgctaaaaagaatgggaagaagaacttcaaaagctcag
cttgtagagattattgaaaagcttcgaaaagagatcccggatatttctcttcgtaccaca
ttgatcacaggatttccgggtgagacacaagaacagcatgaagagctgaaggatttcgta
gatgagatggaatttgacagacttggagtttttacttactcaccggaggaagatacacca
gctgcaactatgacagagcagattccggaagaagtcaaggaagaccgccaggcagaattg
atggaacttcagcaggaaatcgcatttgatctggcagaagatatggtcggacgtgaagtt
ctcgttatgattgaaggaaaagttgcagatgaaaatgcatatgtaggaagaacttataaa
gatgcaccgaatgtggatggcttgatttttatcaatacagacgaagaattgatgagtgga
gattttgcaagagtccgcgtgaccggtgcactggaatatgatttgataggagagctgata
taa
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