Dorea formicigenerans: NQ560_09235
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Entry
NQ560_09235 CDS
T08666
Symbol
carB
Name
(GenBank) carbamoyl-phosphate synthase large subunit
KO
K01955
carbamoyl-phosphate synthase large subunit [EC:
6.3.5.5
]
Organism
dfm
Dorea formicigenerans
Pathway
dfm00220
Arginine biosynthesis
dfm00240
Pyrimidine metabolism
dfm00250
Alanine, aspartate and glutamate metabolism
dfm01100
Metabolic pathways
dfm01110
Biosynthesis of secondary metabolites
dfm01240
Biosynthesis of cofactors
Module
dfm_M00051
De novo pyrimidine biosynthesis, glutamine (+ PRPP) => UMP
Brite
KEGG Orthology (KO) [BR:
dfm00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
NQ560_09235 (carB)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
NQ560_09235 (carB)
00220 Arginine biosynthesis
NQ560_09235 (carB)
Enzymes [BR:
dfm01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.5 Carbon-nitrogen ligases with glutamine as amido-N-donor
6.3.5.5 carbamoyl-phosphate synthase (glutamine-hydrolysing)
NQ560_09235 (carB)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
CPSase_L_D2
CPSase_L_D3
ATP-grasp
MGS
Dala_Dala_lig_C
ATP-grasp_3
ATPgrasp_Ter
GARS_A
ATP-grasp_4
ATP-grasp_5
ATP-grasp_2
Motif
Other DBs
NCBI-ProteinID:
UWP18692
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Position
complement(1889021..1892254)
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AA seq
1077 aa
AA seq
DB search
MPRNKEIKKVLVIGSGPIVIGQAAEFDYAGTQACRSLKEEGLEVVLLNSNPATIMTDKDI
ADKVYIEPLTVEVVEQLIMKEKPDSVLPTLGGQAALNLAMELEERGFFKEHNVRLIGTTA
QTIKKAEDRLEFKSTMEKIGEPCAASLVVESVEDGIEFAEKIGYPVVLRPAYTLGGSGGG
IAHDRRQLVEILENGLRLSRVGQVLVERCIAGWKEIEYEVMRDAAGNCITVCNMENIDPV
GVHTGDSIVVAPSQTLGDKEYQMLRTSALNIISELNITGGCNVQYALNPESFEYCVIEVN
PRVSRSSALASKATGYPIAKVAAKIALGYTLDEIKNAVTKKTYASFEPMLDYCVVKIPRL
PFDKFISAKRTLTTQMKATGEVMSICDNFEGALMKAIRSLEQHVDSLMSYDFSHLSREEL
MNALDVVDDQRIWKIAEAVRRGIPYTEIHKITKIDIWFIDKIANLVEMEQSLRACAPRVA
SGRGGIGKELLKEAKRLEFPDEVIARLTGLTERQVHDLRMVYGITASYKMVDTCAAEFAA
ETPYYYSVFGSENEVEETSGKKKVLVLGSGPIRIGQGIEFDFCSVHCTWAFAKEGYETII
INNNPETVSTDFDIADKLYFEPLTPEDVESIVDLERPDGAVVQFGGQTAIKLTEALMKMG
VPILGTKAEDVDAAEDRELFDEILEKCQIPRPTGGTVFTAEEAKTVANRLGYPVLVRPSY
VLGGQGMQIAINDNDIEEFIGIINQIAQDHPILVDKYLQGKEIEVDAVCDGEDILIPGIM
EHIERAGIHSGDSISVYPAKSISDKTKRTIEEYTRRLAKSLHVIGLINIQFIVCGEEVYV
IEVNPRSSRTVPYISKVTGIPIVPLATKVIIGHKIKELGYTPGLQPEADYYAVKMPVFSF
EKIRDADISLGPEMKSTGECLGIAKTFDEALYKAFLGAGIKLPKFSNMIMTVRDEDKDEA
VEIGKRFEKIGYKIFATKGTAEALTEAGVKAIAVNKIEQSTPNLMDLILGHKIDLVIDTP
PQGAEHSKDGFVIRRSAIETGVNVLTAIDTAKALITSLENTDIQKLTLVDIAKIQAV
NT seq
3234 nt
NT seq
+upstream
nt +downstream
nt
atgccaagaaataaagaaattaagaaagtacttgtaattggatctggccctattgtcatt
ggtcaggcagcagagtttgactatgcgggtacacaggcatgtcgttctttgaaagaagaa
ggactggaagttgtgctgttgaattcaaatcctgcgactattatgacggacaaggatatt
gctgataaagtatacatagagccattgacggtagaagttgttgaacagcttattatgaaa
gagaagccagacagtgtcctgccgactctgggaggacaggcagcgctgaatcttgctatg
gaattggaagagcgggggtttttcaaagaacataatgtccgcttgatcggaacaacagct
cagacaattaagaaggcagaggatcgtctggaatttaaatcaacaatggaaaaaattggc
gaaccatgtgcagcatcacttgtagttgaaagcgtagaggacggaatcgaatttgcagaa
aagattggatatccggtcgttcttcgtccggcatacactcttggcggaagcggtggtgga
attgcacatgacagacgtcagcttgtagagattcttgaaaatggacttcgtctttcccgt
gtgggtcaggtacttgttgaacgttgtatcgcaggatggaaagagattgaatatgaggta
atgcgtgatgcagcaggaaattgtatcacggtttgtaatatggaaaatattgatccggtt
ggtgtacataccggagacagtattgttgtagcaccgtctcagacgctgggcgataaagaa
tatcagatgctccgtacatcagccctcaatatcattagtgagcttaatattacaggaggc
tgcaacgtacagtatgccctgaatccggaatcatttgaatattgtgttattgaagtaaat
ccacgtgtcagccgttcttctgcgcttgcatcgaaagctacgggttatccaatcgcaaag
gtagcagcaaagattgcgcttggatatacacttgacgagattaaaaatgcagttacaaag
aagacatatgcaagttttgaaccgatgcttgattattgtgttgttaagattccgagactt
ccatttgataaatttatcagtgcaaaacgtacactgactacacagatgaaggcgaccgga
gaggtcatgagtatttgtgataattttgagggagcgcttatgaaagcaatccgatctttg
gaacagcatgtggacagtcttatgtcctatgatttcagtcatctttccagagaagaactg
atgaacgcattggacgtagtagacgatcagagaatctggaagattgcagaggcagttaga
agaggaattccttatacagaaatacataagattacaaagattgatatttggtttatcgat
aagattgcaaacctggtagagatggagcagtctctgcgtgcatgcgcgccaagagtagcg
tctggacgtggcggaattggaaaggaattattaaaagaagcaaaacgcctggagttcccg
gacgaggttatcgcaagactgacaggtcttacagaaagacaggtgcatgatcttagaatg
gtatacggtattaccgcatcttacaaaatggtagatacctgtgccgctgagttcgcggca
gaaacaccgtattattactctgtatttggaagtgaaaatgaagtagaagagacttccggt
aagaaaaaggttcttgtccttggttctggtccaatccgtatcggacagggaatcgagttc
gatttctgttccgtacactgtacatgggcatttgcaaaagagggatacgagacaattatc
atcaataataacccggagacagtcagcacggacttcgatattgccgataagctttatttt
gagccgctgacaccggaagatgtagagagcattgtagacctggagaggccggacggagca
gttgttcagttcggtggtcagacagcaattaaattgacagaagcattgatgaaaatggga
gtgccaattcttggtacaaaagcagaagatgtagatgcagccgaagatcgcgaattattt
gatgaaattctggaaaaatgccagattccaagaccgactggtggaactgtatttacagct
gaggaggcaaagactgttgcgaacagactcggctatccggtactggtaagaccgtcctat
gtgcttggcggacaaggtatgcagattgctattaacgataatgatatcgaggaatttatc
ggaatcatcaatcagattgcgcaggatcacccgattctggtagacaaatatttacaggga
aaagagattgaggtcgatgccgtatgtgacggagaagatatcctgattccaggtatcatg
gagcatattgagcgtgcgggtatccattccggagatagtatctctgtatatcctgcaaag
agtatttctgataagacaaaacgtactattgaagaatatacaagacgacttgcaaaatcc
ctgcatgtcatcggactgattaatattcagttcattgtgtgtggtgaagaggtttatgtt
atcgaggtaaacccaagatccagccgtacggtaccatacattagtaaagtaactggaatt
ccaattgttccactggcaacaaaagtgattatcggtcacaagatcaaagaacttggatat
acaccgggacttcagccggaggcagattactatgcagttaaaatgccggtattctctttc
gagaagatccgtgatgcagatatcagccttggaccagaaatgaagtctacaggagagtgc
cttggaattgccaagacatttgacgaggcgctatataaagcattcttaggtgcaggaatc
aaacttccgaaatttagcaatatgattatgactgtccgtgatgaggataaggatgaggct
gtagaaatcggtaaacgttttgaaaagatcggatacaagatttttgcgacaaaaggaaca
gcagaagcacttacagaagcaggtgtgaaagcaattgcagtcaacaagattgaacagagc
acaccgaacctcatggatctgatccttggacataagatagatcttgttattgatactccg
ccacagggagcagaacactccaaagacggtttcgtaattcgaagaagtgcaattgagacg
ggtgtcaatgtcctgacagctatcgatacagcaaaagcactgatcaccagtctggagaat
acagatattcagaaactgacactggtggacattgcaaagattcaggcagtatag
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