Dorea formicigenerans: NQ560_11540
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Entry
NQ560_11540 CDS
T08666
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
dfm
Dorea formicigenerans
Pathway
dfm03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
dfm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
NQ560_11540
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dfm03400
]
NQ560_11540
Enzymes [BR:
dfm01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
NQ560_11540
DNA repair and recombination proteins [BR:
dfm03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
NQ560_11540
Prokaryotic type
NQ560_11540
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
PTHB1_CtH
Motif
Other DBs
NCBI-ProteinID:
UWP19129
LinkDB
All DBs
Position
complement(2386217..2386885)
Genome browser
AA seq
222 aa
AA seq
DB search
MAAINNDWLEALQGEFKKPYYKKLFETVNEEYRTRQIFPPADDIFNAFHLTPLHKVKVVI
LGQDPYHNVGQAHGLCFSVKKGVDIPPSLVNIYKELHDDLGCTIPNHGCLTKWAEQGVLM
LNTVLTVRAHQANSHRGIGWEEFTDAAIMALNSQNRPIVFILWGAPAQRKASMLNNPNHL
ILKAPHPSPLSAYRGFFGSKPFSKTNKFLEAGGVEPIDWQID
NT seq
669 nt
NT seq
+upstream
nt +downstream
nt
atggcagcaattaataatgactggcttgaggctttgcagggggaatttaaaaagccgtat
tataaaaaactatttgagacagtaaatgaagaatatcgaacaagacagatatttccaccg
gcggatgacattttcaatgcctttcatttgacaccattacataaagtaaaggttgtgatt
cttggacaggatccatatcataatgtaggacaggctcatggactctgtttttctgtaaag
aaaggtgtggatattccaccatcactggtaaatatctataaagaacttcacgatgatctg
ggctgtaccatcccgaatcatggctgcctgacaaaatgggcagagcaaggtgttctgatg
ctcaacacagtattgactgtacgggcacatcaggcgaattcacacagaggcattggctgg
gaggagttcacggatgcagcaattatggcacttaatagccagaatcgtccgattgtattt
attctttggggagctccagcacagagaaaagccagcatgttgaataatccgaaccatctg
attctgaaagcaccacatccaagtccgctttccgcttaccgtggtttctttggaagtaaa
ccatttagcaagacgaataaattcctggaagcaggcggtgtggaaccaatcgactggcag
attgattag
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