Dickeya fangzhongdai DSM 101947: CVE23_00420
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Entry
CVE23_00420 CDS
T05277
Name
(GenBank) XylR family transcriptional regulator
KO
K02529
LacI family transcriptional regulator, galactose operon repressor
Organism
dfn
Dickeya fangzhongdai DSM 101947
Brite
KEGG Orthology (KO) [BR:
dfn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
dfn03000
]
CVE23_00420
Transcription factors [BR:
dfn03000
]
Prokaryotic type
Helix-turn-helix
LacI family
CVE23_00420
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PBP1_XylR
Peripla_BP_3
HTH_AraC
HTH_18
Peripla_BP_4
VRP1
Motif
Other DBs
NCBI-ProteinID:
ATZ92575
UniProt:
A0A2K8QHM4
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Position
96421..97626
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AA seq
401 aa
AA seq
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MFEKRYRITLLFNANKVYDRQVVEGVGEYLQASQCDWDIFIEEDFRCRIENIRDWLGDGV
IADFDDPAIIALLSGVRVPLVGVGGSYHHPQDYPPVHYIATDNHALVESAFLHLKNKGLN
RFAFYGLPASVGKGWAQEREHAFRQLVAAEQYQGVVYQGMETSPGNWQYAQNRLADWIQT
LPPQTGIIAVTDARARHLLQVCEHLNIAVPEKLCVIGIDNEELTRYLSRVALSSVAQGTR
QMGYRAAKLLHQLLLTPYALPLQRILVPPLRVVERSSTDYRSVHDPAVIQAMHFIRHHAC
KGIKVEQVLDAVGLSRSNLEKRFKDETGQTIHGMIHTEKLERARNLLVSTSLSINEISSM
CGYPSLPYFYSVFRKDYDLTPREYRERYGEGGYGDSRYDNE
NT seq
1206 nt
NT seq
+upstream
nt +downstream
nt
atgtttgagaaacgctaccgtattacgttgctgttcaatgccaacaaagtatacgaccgg
caggtggttgaaggcgtaggtgagtatctgcaggcgtctcagtgcgactgggatatcttc
atcgaggaggattttcgctgtcgcatcgaaaatatccgcgactggctgggggatggcgtg
atcgcggatttcgacgatccggcgattatcgcattgctgtccggggtgcgggtgccgctg
gtgggtgtgggtggttcttatcaccatccgcaggactatccgccggtgcactatatcgcc
accgataaccacgcgctggtggagagcgcgtttttgcatctgaagaataaggggttgaac
cggttcgcgttttacggcctgccggcatcggtggggaaagggtgggcgcaggaacgggaa
cacgcttttcggcagttggtggcggcggagcagtatcagggcgtggtgtatcagggcatg
gagacatcgccgggcaactggcagtacgctcagaaccggctggcggactggattcagact
ctgccgcctcaaaccggcatcattgcggtgacggatgcccgcgcccgccatctgttgcag
gtgtgcgagcacctgaacatcgcggtgccggaaaagctgtgcgtgattggcatcgataat
gaagaactgacccgctacctgtcgcgcgtggccctatcttcagtggcgcaggggacgcgg
cagatggggtatcgggccgccaaactgttgcatcagttgttgctgacgccctatgcgctg
ccgttgcagcgcattctggtgccgccgctgcgggtggtggaacgcagctcgaccgattac
cgttcggtgcatgacccggcggtgattcaggcgatgcattttatccgtcatcacgcctgt
aaaggcatcaaagtggagcaggtgctggacgcggtcgggctgtcgcgttccaaccttgaa
aaacgcttcaaggatgaaaccgggcagaccattcatggtatgatccacaccgaaaaactg
gagcgggcgagaaatctgctggtgtctacgtcgctgtcgatcaacgagatttcgtctatg
tgtggttatccctcgttgccgtatttttattccgtgttccgtaaggattacgacctgacg
ccgcgcgaataccgcgaacgctatggcgaaggcggctacggcgacagccgatatgacaat
gaatga
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