Dickeya fangzhongdai DSM 101947: CVE23_00875
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Entry
CVE23_00875 CDS
T05277
Name
(GenBank) ADP-glyceromanno-heptose 6-epimerase
KO
K03274
ADP-L-glycero-D-manno-heptose 6-epimerase [EC:
5.1.3.20
]
Organism
dfn
Dickeya fangzhongdai DSM 101947
Pathway
dfn00541
Biosynthesis of various nucleotide sugars
dfn01100
Metabolic pathways
dfn01250
Biosynthesis of nucleotide sugars
Module
dfn_M00064
ADP-L-glycero-D-manno-heptose biosynthesis, sedoheptulose-7P => ADP-LDmanHep
Brite
KEGG Orthology (KO) [BR:
dfn00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
CVE23_00875
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
dfn01005
]
CVE23_00875
Enzymes [BR:
dfn01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.20 ADP-glyceromanno-heptose 6-epimerase
CVE23_00875
Lipopolysaccharide biosynthesis proteins [BR:
dfn01005
]
Core region
CVE23_00875
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Epimerase
GDP_Man_Dehyd
3Beta_HSD
RmlD_sub_bind
NAD_binding_4
Polysacc_synt_2
KR
adh_short
NAD_binding_10
Motif
Other DBs
NCBI-ProteinID:
ATZ92661
UniProt:
A0A2K8QGR8
LinkDB
All DBs
Position
complement(192058..192990)
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AA seq
310 aa
AA seq
DB search
MIIVTGGAGFIGSNIVKALNDDGYRDILVVDNLKDGTKFANLVDLDIADYMDKEDFLASI
VAGDDLGDIEVIFHEGACSSTTEWDGKYMMDNNYQYSKDVLHYCLERGIPFMYASSAATY
GGRTDNFVEERQYEQPLNVYGYSKFLFDQYVREILPQTSSQICGFRYFNVYGPREGHKGS
MASVAFHLNNQINQGEKPKLFAGSENFKRDFIYVGDVAAVNLWFWQHEVSGIFNCGTGRA
ESFQAVADAVLAYHQKDGVEYIPFPEKLKGRYQSYTQADLTNLRAAGYEKPFKTVAEGVA
DYLAWLNRNA
NT seq
933 nt
NT seq
+upstream
nt +downstream
nt
atgattatcgtaactggcggcgctggtttcatcggcagcaatatcgtaaaagcgctgaat
gatgacgggtatcgggatattctggtggtcgacaaccttaaggatggcaccaagttcgcc
aatctggttgatctggacatcgccgactacatggataaggaagacttcctcgccagcatc
gttgccggagacgatctgggcgatatcgaggttattttccacgaaggcgcctgttcctcc
actactgagtgggatggtaagtacatgatggataataactatcagtactccaaggacgtg
ttgcactactgcctggagcgtggaattccattcatgtatgcctcttctgccgctacctac
ggcggccgcaccgacaacttcgtggaagagcgtcaatatgagcagccgctgaatgtttac
ggctattccaagttcctgttcgaccagtatgtgcgtgaaattctgccgcaaaccagctca
cagatttgcggctttcgctacttcaacgtctacgggccgcgcgaaggccacaaaggcagc
atggccagcgtggcgttccacctgaataaccagatcaatcagggtgaaaaacccaaattg
ttcgccggcagcgaaaatttcaaacgcgatttcatctatgtcggcgacgtggcggcggtg
aacctgtggttctggcaacacgaagtttccggcatcttcaactgcggcaccggccgtgcc
gagtccttccaggccgtggcggatgccgtactggcctaccaccagaaagacggcgtggaa
tacatccctttcccggaaaaactgaaaggccgctatcagtcctacacgcaggcagacctc
accaacctgcgcgccgctggttatgaaaagccgttcaaaaccgtagcggaaggggtcgcc
gactacctggcctggctgaaccgcaacgcctga
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