Dickeya fangzhongdai DSM 101947: CVE23_01270
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Entry
CVE23_01270 CDS
T05277
Name
(GenBank) phosphomethylpyrimidine synthase ThiC
KO
K03147
phosphomethylpyrimidine synthase [EC:
4.1.99.17
]
Organism
dfn
Dickeya fangzhongdai DSM 101947
Pathway
dfn00730
Thiamine metabolism
dfn01100
Metabolic pathways
dfn01240
Biosynthesis of cofactors
Module
dfn_M00127
Thiamine biosynthesis, prokaryotes, AIR (+ DXP/tyrosine) => TMP/TPP
Brite
KEGG Orthology (KO) [BR:
dfn00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
CVE23_01270
Enzymes [BR:
dfn01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.17 phosphomethylpyrimidine synthase
CVE23_01270
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ThiC_Rad_SAM
ThiC-associated
Motif
Other DBs
NCBI-ProteinID:
ATZ92726
UniProt:
A0A2K8QGU1
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All DBs
Position
complement(274494..276461)
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AA seq
655 aa
AA seq
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MSTEPTQSTEQNVSGEKKSSGRREQRAAAQQFIDTLRGSTFPNSQRIYLTGSQPDIRVPM
REIQLSPTLVGGSRDNPRYEANEAVPVYDTAGPYGDPATTPDVHRGLGKLRADWIAGRDD
TEALPKASSGFTQQRLADIGLDHLRFEHLPQPKRAKAGRRVTQLHYARQGIITPEMEFIA
IRENMGRERVRGEVLRQQHPGHSFGALLPDNITPEFVRQEVAAGRAIIPANINHPESEPM
IIGRNFLVKVNANIGNSAVTSSIEEEVEKLVWATRWGADTVMDLSTGRYIHETREWILRN
SPVPIGTVPIYQALEKVNGIAENLTWELFRDTLLEQAEQGVDYFTIHAGVLLRYVPMTAK
RLTGIVSRGGSIMAKWCLSHHQENFLYQHFREICEICAAYDVALSLGDGLRPGSIQDAND
EAQFAELHTLGELTKIAWEYDVQVMIEGPGHVPMQMIRRNMTEELEHCHEAPFYTLGPLT
TDIAPGYDHFTSGIGAAMIGWFGCAMLCYVTPKEHLGLPNKNDVKQGLIAYKIAAHAADL
AKGHPGAQIRDNAMSKARFEFRWEDQFNLALDPETARAYHDETLPQESGKVAHFCSMCGP
KFCSMKITQEVRDYAARQEAQAQPVDVGMAQMSAEFRARGSELYHTATSLPQEER
NT seq
1968 nt
NT seq
+upstream
nt +downstream
nt
atgtctacagaaccaacccagtctacagaacagaatgtttccggagaaaagaaatcctcc
ggccgtcgcgaacaacgcgccgccgcccagcagtttatcgacacgctgcgcgggtcgacc
tttcccaactcgcagcgcatttatctgaccggttcacagccggacatccgcgtgccgatg
cgggaaatccagcttagcccgacgctggtgggcggcagccgcgacaatccgcgctatgaa
gccaacgaagcggtgccggtgtatgacaccgccggtccgtatggcgacccggccaccacc
ccggacgtacaccgcgggcttggcaaattgcgcgccgactggattgccgggcgcgacgac
accgaagccttaccgaaagccagctccggctttacccaacaacggctggcggatatcggc
ctcgaccatctgcgttttgaacatctgccgcagcctaagcgcgccaaagccggtcgccgc
gttacccagttgcactacgcccgtcagggcatcatcacgccggagatggaattcatcgcc
atccgtgaaaacatggggcgcgagcgcgtgcgcggcgaggtgctgcgccagcagcatccg
ggccacagtttcggcgcgctgctgccggacaacatcacgccggaattcgtgcgtcaggaa
gtggccgccgggcgcgccatcatccccgccaacatcaaccaccccgaatcggaaccgatg
atcatcggccgcaattttctggtgaaggtgaatgccaatatcggcaactccgccgtgacc
tcgtctatcgaagaagaagtggaaaaactggtgtgggccacccgctggggcgcggacacg
gtgatggacttgtccaccgggcgctacatccatgaaacccgcgagtggatcctgcgcaac
agcccggtgccgatcggcacggtgccgatctatcaggcgctggaaaaggtcaacggcatc
gcggaaaacctgacctgggaactgttccgcgacaccttgctggaacaggcggaacaaggg
gtggattacttcaccatccacgccggcgtgttgctgcgctacgtaccgatgaccgccaaa
cgcctgaccggcattgtgtcgcgcggcggctcgattatggccaagtggtgcctgtcgcac
catcaggaaaacttcctgtaccagcatttccgtgaaatctgcgaaatctgtgccgcctat
gacgtcgcgctgtcgctcggcgacggcctgcgcccgggttccattcaggatgccaacgac
gaagcgcagttcgccgaactgcacacgctgggcgaactgaccaaaatcgcctgggaatac
gacgtgcaggtgatgatcgaaggccccggccatgtgccgatgcagatgatccgccgcaac
atgaccgaagagctggaacactgccacgaggcgccgttctatacgttaggcccgctcacc
accgatatcgcgcccggttacgaccacttcacctccggcatcggcgcggcgatgatcggc
tggttcggctgcgccatgctgtgctacgtcaccccgaaagagcatctggggctaccgaac
aaaaacgacgtcaaacaagggttgatcgcctataaaattgccgcccacgccgccgacctg
gcgaaaggccaccctggcgcgcagatccgcgacaacgccatgtccaaagcgcgttttgaa
ttccgctgggaggaccagttcaatctggctttggacccggaaaccgcccgcgcctaccac
gacgaaaccctgccgcaggaatccggcaaggtggcgcatttctgctcgatgtgcggaccg
aaattctgttcgatgaagataacccaggaagtgcgcgactacgccgcccgtcaggaggcg
caggcgcaaccggtggatgtcggcatggcgcaaatgtcggccgaattccgcgcccgcggc
agcgagctgtaccacaccgccaccagcctgccgcaggaagaacgctga
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