Dickeya fangzhongdai DSM 101947: CVE23_03615
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Entry
CVE23_03615 CDS
T05277
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
dfn
Dickeya fangzhongdai DSM 101947
Brite
KEGG Orthology (KO) [BR:
dfn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
dfn03016
]
CVE23_03615
Enzymes [BR:
dfn01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
CVE23_03615
Transfer RNA biogenesis [BR:
dfn03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
CVE23_03615
Prokaryotic type
CVE23_03615
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB-C_2
TruB_C_2
Motif
Other DBs
NCBI-ProteinID:
ATZ93145
UniProt:
A0A2K8QJ90
LinkDB
All DBs
Position
756472..757428
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AA seq
318 aa
AA seq
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MSRPRRRGRDIHGVLLLDKPQGASSNDVLQKVKRLFNANKAGHTGALDPLATGMLPICLG
EATKFSQYLLDADKRYRVIARLGQRTDTSDADGNVIQERPVAFTHDLLMPALDSFRGDTQ
QVPSMYSALKYQGRPLYEYARQGLTVPREARDITVYELQFIRWEGDELELEIHCSKGTYI
RTIIDDLGEKLGCGAHVIYLRRLQVATYPIERMVTLEQLQALREQAEAQEQPIGELLDVL
LLPMDTAVQAFPEVNLSPVVAGYLKLGQAVRAAATPANGMVRITEGDARRFIGMGEIDDE
GRVAPRRLVVENPVPTDA
NT seq
957 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcgtcctcgtcgccgcggccgggatatccacggcgttttgctgctggataaaccg
caaggagcatcgtccaacgatgtgctgcagaaggtaaaacgcctctttaatgccaataaa
gccgggcataccggcgcgctggacccgctggcaaccggcatgttgccgatatgtctgggt
gaggcgaccaagttttcccagtacctgctggatgccgataaacgctaccgagtgatagct
cgtctggggcagcgtacggatacttcggatgccgacggcaatgtgattcaggagcgcccg
gtagcctttacccatgatctgctgatgccggcgctggacagctttcgcggcgatacccaa
caggtgccgtcgatgtattccgcgctgaaatatcagggtcgcccgctgtacgaatatgcg
cgtcaggggctgaccgtgccgcgtgaagcgcgtgatatcacggtgtatgagttgcagttt
atccgctgggaaggggatgagctggaactggaaatccattgttccaagggaacttacatc
cgcaccatcattgatgatctgggcgagaagctggggtgtggcgcccatgtgatttacctg
cgccggttgcaggtggcgacttatccgatcgagcggatggtgactctggagcagttgcag
gcgttgcgtgaacaggcggaagcgcaggagcagccgatcggcgaattgctggatgtgctg
ctgttgccgatggataccgctgtgcaggcgtttccggaagttaatctgtcgccggtggtg
gcgggttatctcaagctggggcaagcggtgcgtgctgccgctacgccggctaacggtatg
gtgcgcattaccgagggtgacgcgcgccggtttatcggtatgggggaaatcgatgacgaa
ggtcgggtcgcgccgcgtcgtctggtagtagaaaaccctgtgccgacggatgcctga
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