Dickeya fangzhongdai DSM 101947: CVE23_04815
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Entry
CVE23_04815 CDS
T05277
Name
(GenBank) rhamnogalacturonate lyase
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
dfn
Dickeya fangzhongdai DSM 101947
Brite
KEGG Orthology (KO) [BR:
dfn00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
CVE23_04815
Enzymes [BR:
dfn01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
CVE23_04815
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GFIT
Motif
Pfam:
CBM-like
fn3_3
CarboxypepD_reg
EMC7_beta-sandw
Rhamnogal_lyase
CarbopepD_reg_2
BcsB
Motif
Other DBs
NCBI-ProteinID:
ATZ93356
UniProt:
A0A2K8QIN5
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Position
complement(1024252..1025982)
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AA seq
576 aa
AA seq
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MNKPLQIWRTPLLALALVLPLTATGAVKLTLDGMNSTLDNGLLKVRFGADGSAKEVWKGG
TNLISRLSGAARDPDKNRSFYLDYYSGGVNEFVPERLEVIKQTPDQVHLAYIDDQNGKLR
LEYHLIMTSGVSGLYSYVVAANTGSAPVTVSELRNVYRFDATRLNALFNSIQRGTPLLYD
ELEQLPKVQDETWRLPDGSVYSKYDFAGYQRESRYWGVMGNGYGAWMVPASGEYYSGDAL
KQELLVHQDAIILNYLTGSHFGTPDMVAQPGFAKLYGPWLLYINQGSDRELVADVSRRAE
HERASWPYRWLDDARYPRQRTTVSGRLRTDAPHATVVLSSSTENFDIQTTGYLFTARTNR
DGRFSLRNVPPGEYRLSAYADGGTQIGLLAQQTVKVEGKKTRLGQIDAARPAPLAWAIGQ
ADRRADEFRFGDRPRLYRWQTEVPANLTFEIGKSRERKDWYYAQTQPGSWHILFNTRAPE
QPYTLNIAIAAASNSGMTTPASSPQLAVKLNGQLLTTLKYDNDKAIYRGAMQSGRYHEAH
IPLPAGALQPGGNRITLELLGGMVMYDAITLTETPQ
NT seq
1731 nt
NT seq
+upstream
nt +downstream
nt
atgaataaacctctgcagatatggcgtaccccgctactggcgctggcactcgtgctgccg
ctgacggcgacgggcgcggtgaaactgacgctcgacggcatgaacagcacgctggataac
gggctgctgaaagtccgctttggcgcggacggcagcgccaaagaagtgtggaaaggcggc
accaacctgatttcccgtctctccggcgcggcgcgcgatccggataaaaaccgcagcttt
tacctcgactactactccggcggcgtcaacgaattcgtgccggaacggctggaggtcatc
aaacagacgccggatcaggtgcacctggcctacatcgacgaccagaacggcaaactgcgg
ctggaatatcacctgatcatgaccagcggcgtcagcggcctttacagctatgtggtggcc
gccaacaccggctcagcgccggtgacggtcagcgagctgcgtaacgtttaccgttttgac
gccacccggctgaacgcgctgttcaacagcatccagcgcggtacgccgttgctgtacgat
gaactggaacagttgccgaaggtgcaggatgaaacctggcgactgccggacggcagcgtc
tactctaaatacgatttcgccggttatcagcgtgaaagccgctactggggcgtgatgggc
aacggttacggcgcctggatggtgcccgccagcggcgaatattactcgggcgacgcgctg
aagcaggaactgctggtgcatcaggacgcgattatcctgaactatcttaccggctcgcat
ttcggcaccccggatatggtggcgcagccgggttttgcaaaactctacggtccgtggttg
ctgtacatcaatcagggtagcgatcgggaactggtggcggacgtcagccgccgggccgaa
catgaacgcgccagttggccttaccgctggctggacgatgcccgctatccgcgccagcgc
actaccgtcagcggtcgcctgcgcaccgatgcgcctcacgccacggtggtgctgagcagc
agcacggaaaacttcgacattcagaccaccggttacctgttcaccgcccgtaccaatcgg
gacggccgtttcagcctgcgcaatgtgccgccgggcgaataccgtctgtcggcctacgcc
gatggcggcacgcaaatcggcctgctggcgcagcagaccgtgaaggtggaaggcaagaaa
acccggctcggtcaaattgacgccgcgcgtcccgcgccgctggcgtgggctatcggtcag
gccgaccgccgggccgacgagttccgcttcggcgatcgcccgcgcctttatcgctggcaa
accgaggtgccggccaacctgaccttcgagatcggcaaaagccgtgaacgcaaggactgg
tactacgcccagacccagcccggcagttggcacattctgttcaacacccgcgcgcccgag
cagccttacaccctgaatatcgccatcgccgccgccagcaacagcggaatgactacgccg
gccagttcgccgcagctggcggtgaaactcaacggtcagttgctgacgacgctgaagtac
gacaacgacaaggccatttataggggcgcgatgcaaagcggccgctaccatgaagcgcac
ataccgctgcccgcgggcgcgctgcagccgggcggcaaccgcatcacgctggagctgctg
ggcggcatggtaatgtacgacgccatcacgctgacggaaacgccacaataa
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