Dickeya fangzhongdai DSM 101947: CVE23_05125
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Entry
CVE23_05125 CDS
T05277
Name
(GenBank) ornithine decarboxylase
KO
K01581
ornithine decarboxylase [EC:
4.1.1.17
]
Organism
dfn
Dickeya fangzhongdai DSM 101947
Pathway
dfn00330
Arginine and proline metabolism
dfn00480
Glutathione metabolism
dfn01100
Metabolic pathways
dfn01110
Biosynthesis of secondary metabolites
dfn04148
Efferocytosis
Module
dfn_M00134
Polyamine biosynthesis, arginine => ornithine => putrescine
Brite
KEGG Orthology (KO) [BR:
dfn00001
]
09100 Metabolism
09105 Amino acid metabolism
00330 Arginine and proline metabolism
CVE23_05125
09106 Metabolism of other amino acids
00480 Glutathione metabolism
CVE23_05125
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
CVE23_05125
Enzymes [BR:
dfn01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.17 ornithine decarboxylase
CVE23_05125
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Ortholog
Paralog
GFIT
Motif
Pfam:
OKR_DC_1
OKR_DC_1_C
OKR_DC_1_N
Beta_elim_lyase
Motif
Other DBs
NCBI-ProteinID:
ATZ93412
UniProt:
A0A2K8QJ11
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All DBs
Position
1110556..1112709
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AA seq
717 aa
AA seq
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MKQLKIAANAAVASRLITLRPVVALSQTDFTDIAAVVVSVEEARSGILSVMHHSGFGIPA
FVVRESWHTSQEVLPPGSEWLSLDKGGDHALQLEKAAAEYQARLLPPFFDTLSKYVGMRN
TTFACPGHQGGAFFRKHPAGRQFFDFYGENLFRSDICNADVKLGDLLIHEGAAKKAQKFA
ATVFNADKTYFVLNGTSAANKVVTNALLTRGDLVLFDRNNHKSNHHGALIQAGATPVYLE
TARNPFGFIGGVDAHCFDDGYLRELVREVAPERADEARPFRLAVIQLGTYDGTIYNARQV
VDSIGHLCDYILFDSAWVGYEQFIPMMEQCSPLLLDLNENDPGIFVTQSVHKQQAGFSQT
SQIHKKDNHIRGQKRFCPHKRLNNAFMLHASTSPFYPLFAALDVNAKMHEGPSGRRLWME
CVRLGIEARKQLLERCSLIKPFVPPTVGGMRWQDHDTDVMAQDVRFFNFEPSDNWHAFEG
YAQQQYFVDPCKLLLTTPGIDAVTGAYTEFGIPATILANYLREHGIIPEKCDLNSILFLL
TPAEDSVKMERLVAALVQFEQLIEQDAPLSEVLPNLYHKYEQRYAGYTLRRLCQEMHDFY
VSHDVKRLQKEMFRKASFPQAVVLPQDAHTAYIRGEVDLVPLADAEGRIAAEGALPYPPG
VLCVVPGEVWGGAVLRYFQALEAGINLMPGFAPELQGVYSVAQEDGSKRLCANVIAR
NT seq
2154 nt
NT seq
+upstream
nt +downstream
nt
atgaaacagttaaaaattgcggctaatgcggcggttgcctcccgtctaatcaccctgcgt
ccggttgtggcgctcagtcaaaccgattttaccgacatcgcggccgtggtggtatcggtt
gaggaggcgcgcagcggcatcctgtcggtgatgcatcactccggtttcggtatcccggca
ttcgtagtgcgggaatcgtggcacaccagtcaggaagtactgccgccgggcagcgagtgg
ctgagtctggataaaggcggggatcacgcgctccagttggaaaaagcggcggcggagtat
caggcgcggttgttgccgccgttctttgacacgctgtccaagtatgtcggcatgcgcaac
accacttttgcctgtccgggtcatcagggcggggcgttttttcgcaagcatccggcgggt
cgccagtttttcgatttttacggcgaaaaccttttccggtccgatatctgcaacgcggat
gtgaagctgggcgatctgctgattcatgaaggggcggccaaaaaggcgcagaagttcgcg
gccaccgtgttcaacgccgacaaaacctattttgtgctgaacggtacctcggcagccaac
aaagtggtgaccaacgccttgctgacgcgcggcgatctggtgctgttcgaccgcaataac
cacaaatccaatcatcatggcgcgctgattcaggccggcgcgacgccggtttatctggaa
accgcccgcaacccgtttggttttatcggtggggtggacgcgcactgttttgacgacggt
tacctgcgtgagctggtgcgcgaagtcgcgccggagcgtgccgatgaagcccgcccgttc
cgtctggcggtgattcagctaggcacctacgacggtactatctataacgcccggcaggtg
gtggacagcatcggtcatctgtgcgactacatcctgttcgactccgcctgggtgggatac
gagcaattcatcccgatgatggaacagtgctcgccgctgttgctggaccttaacgagaac
gatccggggatttttgttacccagtcggtgcataagcagcaagccggtttctcgcagacc
tcgcagattcacaagaaagacaaccatattcgcggacagaagcgcttctgcccacacaaa
cgcctcaacaatgcgttcatgttgcacgcgtccaccagcccgttttatccgttattcgcc
gcgctggacgtcaacgccaaaatgcacgaggggccgagcggccgccggctgtggatggag
tgcgtcaggctggggatcgaggcgcgcaagcaattgctggagcgttgttccctgatcaag
ccgttcgtgccgccgacggtaggcggcatgcgctggcaggaccatgacaccgacgtgatg
gcgcaggacgtgcgtttcttcaacttcgaaccgagcgacaactggcacgccttcgaaggc
tatgcgcagcaacagtattttgtcgacccgtgcaaactgctgctgactacgccggggatt
gacgcggtgaccggcgcttataccgagtttggtattccggcgaccattctcgccaactat
ctgcgtgaacacggcatcattccggaaaaatgcgatcttaactcgattctgttcctgctg
accccggcggaagacagcgtgaagatggagcgtctggtggcggcgctggtgcagttcgag
caactgatcgagcaggatgcgccgttaagcgaagtcttgccgaatctgtatcacaaatat
gagcagcgctatgccggttataccttgcgccgcctgtgtcaggaaatgcacgatttttac
gtcagccacgatgtgaagcggctgcaaaaagagatgttccgcaaagcctctttcccgcag
gcggtggtgttaccgcaggatgctcacacggcgtatatccgcggcgaggtggatctggtg
ccgctggccgacgcggaagggcgcatcgcggcggaaggggcgttgccttacccgccgggt
gtgctgtgcgtagtgccgggggaagtctggggcggggcggtgttgcgttatttccaggcg
ctggaggcaggcatcaacctgatgccgggttttgcgccggaattgcagggcgtctacagc
gtggcgcaggaagacggcagcaaacgcctgtgcgcgaatgtgattgctcgctaa
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