Dickeya fangzhongdai DSM 101947: CVE23_05780
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Entry
CVE23_05780 CDS
T05277
Name
(GenBank) exonuclease subunit SbcD
KO
K03547
DNA repair protein SbcD/Mre11
Organism
dfn
Dickeya fangzhongdai DSM 101947
Brite
KEGG Orthology (KO) [BR:
dfn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dfn03400
]
CVE23_05780
DNA repair and recombination proteins [BR:
dfn03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
CVE23_05780
Archaeal homologous recombinant proteins
CVE23_05780
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SbcD_C
Metallophos
Metallophos_2
Motif
Other DBs
NCBI-ProteinID:
ATZ93528
UniProt:
A0A2K8QKH5
LinkDB
All DBs
Position
complement(1248150..1249382)
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AA seq
410 aa
AA seq
DB search
MRIIHTSDWHLGQYFYTRSRAPEHQAFLHWLVQQVEQYQADAVIVAGDVFDNGAPPSYAR
EMYNHFVVALQRTGCQLVVMGGNHDSVATLNESRALLACLNTRVVAGFDGDIHEQVLVLN
NRAGEPGALLCAVPFLRPRDVLTSQAGQSGAQKQQALQDAITHHYQRCYQLACEQREALG
RELPIVLTGHLTTVGVATSDSVRDIYIGTLDAFPAQAFPPADYIALGHIHRPQRVAQCEH
IRYSGSPIPLSFDELNHEKSVYLVHFEQGKLQEVTALTVPTEQPMQLVKGNLPEIERRLA
GFRDYHGDKPVWLDIEIATQDYLSDIQQHIQALTEPLNVEVLLLRRAREQQQQMLVQLEK
ETLEELQPAEVFARRLALESDLDEARQQRLKGLFDRVIQEIDEQRREASA
NT seq
1233 nt
NT seq
+upstream
nt +downstream
nt
atgcgaattattcacacgtctgactggcatctcggtcagtacttttatacccggagccgt
gcgcctgagcatcaggcatttttacactggctggttcagcaggttgagcagtatcaggcc
gatgcagtaatagtagcaggcgatgtgttcgacaacggcgcgccgcccagttatgcccgt
gaaatgtataaccattttgtggtggcgttgcagcgcaccggctgccagttggtggtgatg
ggcggcaaccatgattcggtcgccaccctgaatgaatcacgcgcgctgctggcctgcctg
aatacccgggtggtcgccggttttgacggcgatatccacgaacaggtgctggtgctgaac
aaccgtgcaggcgagcccggcgcgctgctgtgcgccgttccttttttgcgtccgcgcgac
gtgctcaccagccaggccggccagtccggcgcgcaaaaacagcaggcgttgcaggatgcc
atcacccatcattatcagcgctgttaccagctcgcctgcgagcagcgtgaagcgctgggt
cgcgaactgccgattgtgctgaccggccacctcaccacggtgggcgtcgccacgtccgat
tcggtgcgcgatatctatatcggcacgttggacgcgttcccggcgcaggccttccccccg
gcggactacatcgcgctcggccatattcatcgcccgcagcgggtggcgcaatgcgaacac
atccggtacagcggctcgccgatcccgctgagttttgacgaactgaatcatgagaaatcg
gtgtatctggtgcatttcgagcagggaaaactgcaggaggtcaccgcgctgaccgtgccg
accgaacaaccgatgcaactggtgaaaggcaatctgccggagatcgaacgccggctagcc
ggattccgcgactatcacggcgacaaaccggtgtggctggacattgaaatcgccacccag
gattacctgagcgacattcagcagcacattcaggcgctgaccgaaccgctgaacgtggaa
gtgctgttgctgcgccgggcgcgggaacagcagcaacaaatgctggtgcaactggaaaag
gaaacgctggaggagctgcaacccgccgaggtgtttgcccgacggctggcgctggagagc
gatctggacgaggcgcgccagcagcgcctgaaagggttgttcgaccgggtcattcaggag
attgacgagcagcgacgggaggcgtccgcatga
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