Dickeya fangzhongdai DSM 101947: CVE23_06265
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Entry
CVE23_06265 CDS
T05277
Name
(GenBank) DNA topoisomerase (ATP-hydrolyzing) subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
dfn
Dickeya fangzhongdai DSM 101947
Brite
KEGG Orthology (KO) [BR:
dfn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
dfn03032
]
CVE23_06265
03400 DNA repair and recombination proteins [BR:
dfn03400
]
CVE23_06265
Enzymes [BR:
dfn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
CVE23_06265
DNA replication proteins [BR:
dfn03032
]
Prokaryotic type
DNA Topoisomerases
CVE23_06265
DNA repair and recombination proteins [BR:
dfn03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
CVE23_06265
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
DUF3450
Motif
Other DBs
NCBI-ProteinID:
ATZ93619
UniProt:
A0A2K8QJE1
LinkDB
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Position
1357881..1360514
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AA seq
877 aa
AA seq
DB search
MSDLAREITPVNIEEELKSSYLDYAMSVIVGRALPDVRDGLKPVHRRVLYAMSVLGNDWN
KPYKKSARVVGDVIGKYHPHGDSAVYDTIVRMAQPFSLRYMLVDGQGNFGSIDGDSAAAM
RYTEVRMSKIAHELLSDLDKETVDFVPNYDGTEQIPDVMPTRIPNLLVNGSSGIAVGMAT
NIPPHNLTEVINGCLAYIDDENISVEGLMTHIPGPDFPTAAIINGKRGIEEAYRTGRGKV
YIRARAEVEADAKSGRETIIVHEIPYQVNKARLIEKIAELVKEKRIEGISALRDESDKDG
MRIVIEIKRDAVGEVVLNHLYSQTQMQVSFGINMVALHQGQPKLMTLKEILAAFVRHRRE
VVTRRTIFELRKARERAHILEGLAIALANIDPIIELIRHASTPAEAKNALVAQAWALGSV
AAMLERAGDDAARPEWLEPEFGIHEGKYHLTEQQAQAILDLRLQKLTGLEHEKLLDEYKE
LLEQIAELLFILRSPERLMEVIREELEAIREQYNDARRTEITHNSADINIEDLISEENVV
VTLSHQGYVKYQPLSDYEAQRRGGKGKSAARIKEEDFIDRLLVANTHDTILCFSSRGRLY
WLKVYQLPEASRGARGRPIINLLPLEQDERITAILPVREYEEGMNVFMATASGTVKKTAL
TEFSRPRSAGIIAVNLNDGDELIGVDLTDGSNEVMLFSAEGKVVRFSESAVRTMGRTATG
VRGINLQDDDLVVSLIVPRGEGDILTVTQNGFGKRTAVTEYPVKSRATKGVISIKVSERN
GKVVGAVQVDSADQIMMITDAGTLVRTRVSEVSIVGRNTQGVTLIRTAEDERVVGLQRVA
EPVEDDELDSVVPVDGELPEEDIDEPENDDDTPADDE
NT seq
2634 nt
NT seq
+upstream
nt +downstream
nt
atgagcgacctagccagagaaattacaccggtcaacatcgaggaagagctgaaaagttca
tatctggattacgccatgtccgtcatcgtcgggcgtgcgttaccggacgttcgcgatggt
cttaagccggtacaccgccgcgtgctgtacgcgatgagtgtgctgggtaacgactggaac
aagccttataaaaaatcggcccgtgtggtcggggacgttatcggtaaatatcacccgcat
ggtgatagcgcggtttacgacactatcgtgcgtatggctcagccgttctcgctgcggtac
atgctggtggacggccagggcaacttcggttccatcgacggcgactccgccgcggcgatg
cgttataccgaagtgcgcatgtcgaaaatcgcccacgaactgctttccgatctggataaa
gagacggtggattttgtgcctaactacgacggcacagagcagatcccggacgtgatgccc
acccgtatccccaacctgctggtcaacggttcttccgggatcgcggtggggatggcgacc
aacattccgccccataacctgacggaagtgattaacggctgtctggcctatatcgatgat
gaaaacatcagcgtcgaagggctgatgacccatattccggggccggacttcccgaccgcc
gccatcatcaacggcaagcgcggcattgaagaagcctaccgcaccggccgcggcaaagtg
tatatccgcgcccgcgccgaagtggaggcggacgccaaatccggccgtgaaaccatcatc
gtgcatgaaatcccttatcaggtgaacaaggcgcgactgattgaaaagatcgccgagctg
gtaaaagagaagcgcattgaaggcatcagcgcgctgcgtgacgagtccgacaaggacggc
atgcgcatcgtgattgaaatcaagcgcgatgccgtaggcgaggtggtgctcaaccatctg
tactcccagactcagatgcaggtgtcgttcggcatcaacatggtggcgctgcatcagggc
cagccgaagctgatgaccctcaaggaaattctggcggcatttgtccgtcaccgccgcgaa
gtggtgacgcgtcgtaccattttcgaactgcgcaaagcgcgcgaacgcgcccatatcctg
gaaggtctggcgattgcgctggctaatatcgacccgatcatcgagctgatccgccatgct
tctaccccggccgaagccaaaaacgcgctggtggcgcaggcgtgggcgctgggcagcgtg
gccgccatgctggagcgcgccggcgatgacgctgcgcgtccggaatggctggagccggag
ttcggcatccacgagggtaaatatcacctgaccgaacagcaggcgcaggcgattctggat
ttgcgtctgcagaaactgaccggtctggaacatgaaaaactgctggatgaatacaaggaa
ctgctggagcagatcgccgaactgctgttcatcctgcgcagtcctgaacgtctgatggaa
gtgatccgcgaagagctggaggcgatccgcgagcagtacaacgacgcgcgtcgtaccgag
atcacccataacagcgccgacatcaatatcgaagatctgatttccgaagagaacgtggtg
gtgaccttgtcgcatcagggttacgtcaagtatcagccgctgagcgactatgaagctcag
cgtcgtggcggcaaaggcaaatccgccgcccgcatcaaggaagaggactttattgatcgg
ctgctggtggcgaatacccacgacaccatcctgtgcttctccagccgtggccgtctctac
tggctgaaagtgtatcagttgccggaagcgagccgcggcgcccgcggtcgtccgatcatc
aacctgttgccgttggagcaggatgaacgcattaccgccattctgccggtgcgcgagtac
gaagagggcatgaacgtgttcatggccacggccagcggtacggtgaagaagaccgcgctg
actgagtttagccgtccgcgcagcgccggtatcatcgctgttaatctcaacgacggcgac
gagctgattggcgtcgacctgaccgacggcagcaatgaagtgatgctgttctccgccgaa
ggcaaggtggtgcgtttctccgaatcggctgtacgtactatgggacgtaccgctaccggg
gtgcgcggcatcaacctgcaggacgacgatctggtggtgtcgctgattgtgccgcgtggc
gaaggcgatattctgactgtgacgcagaatggcttcggcaagcgtaccgccgtcaccgag
tatccggtgaaatcccgtgctaccaaaggtgttatctccatcaaggtgagcgagcgcaac
ggtaaggtggtcggcgcggtgcaggtcgattccgccgatcagatcatgatgatcaccgat
gccggtacgctggtgcgtactcgtgtatccgaggtcagcatcgttggtcgtaatactcag
ggcgtgacgctgattcgtaccgctgaggacgagcgagtggttggcctgcagcgtgtggct
gagccggtggaagacgatgaactcgacagcgtggtgccggttgacggcgaactgccggaa
gaggacatcgatgaaccggagaacgatgacgatacgccggcagacgatgaataa
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