Dickeya fangzhongdai DSM 101947: CVE23_06655
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Entry
CVE23_06655 CDS
T05277
Name
(GenBank) tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB
KO
K06168
tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:
2.8.4.3
]
Organism
dfn
Dickeya fangzhongdai DSM 101947
Brite
KEGG Orthology (KO) [BR:
dfn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
dfn03016
]
CVE23_06655
Enzymes [BR:
dfn01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.3 tRNA-2-methylthio-N6-dimethylallyladenosine synthase
CVE23_06655
Transfer RNA biogenesis [BR:
dfn03016
]
Prokaryotic type
tRNA modification factors
Methylthiotransferases
CVE23_06655
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM
B12-binding
TRAM_2
Motif
Other DBs
NCBI-ProteinID:
ATZ96583
UniProt:
A0A2K8QSY7
LinkDB
All DBs
Position
complement(1439183..1440607)
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AA seq
474 aa
AA seq
DB search
MTKKLHIKTWGCQMNEYDSSKIADLLESTHGYQLTEVAEEADILLLNTCSIREKAQEKVF
HQLGRWKTLKDVNPNLIIGVGGCVASQEGEHIRDRAHYVDVIFGPQTLHRLPEMINHVQG
TRSPIVDISFPEVEKFDRLPEPRAEGPTAFVSIMEGCNKYCTFCVVPYTRGEEVSRPVDD
VLFEIAQLAAQGVREVNLLGQNVNAYRGATHDDDICSFAELLRLVATIDGIDRIRFITSH
PIEFTDDIISVYEDTPELVSFLHLPVQSGSDRVLTMMKRRHTALEYKAIIRKLRKARPAI
QISSDFIVGFPGETQEDFEQTMKLIADVDFDMSFSFIYSPRPGTPAADMVDDVTEEEKKQ
RLYILQERINQQAMQYSRRMMGTVQRILVEGTSRKSVMELSGRTENNRVVNFEGTPDMIG
KFVDVEIVDVYPNSLRGVVIRTEDQMDLRVSESPTSVIARTRKENELGVGIYQP
NT seq
1425 nt
NT seq
+upstream
nt +downstream
nt
atgacaaagaaactgcatatcaaaacctggggctgtcagatgaatgaatacgattcatcg
aagatagccgatctcctggaaagtacgcacggttaccagctgaccgaagtcgcggaagaa
gccgacattctgctgctgaatacctgttcgatccgtgaaaaggcgcaggaaaaagtgttt
catcagctcggccgctggaaaacgctcaaagacgtcaacccgaatctgattatcggcgtg
ggcggctgcgtagcttcgcaggaaggtgaacacattcgcgaccgtgcgcattacgtggac
gtgattttcgggccgcagaccctgcatcgtctgccggaaatgattaaccatgtgcagggt
acccgcagcccgatcgtggatatcagtttcccggaagtggaaaaattcgaccggctgccg
gaaccgcgcgccgaagggccgaccgcattcgtctccatcatggaaggctgcaacaaatac
tgtaccttctgcgtggtgccttatacccgcggcgaagaagtcagccgcccggttgacgac
gtcctgtttgaaatcgcccagctggcggctcagggcgtacgtgaagtcaacctgctgggc
cagaacgtgaacgcttaccgcggcgcgacgcacgatgacgacatctgcagttttgccgaa
ctgctgcgtctggtggcgacgattgacggtatcgaccgcatccgcttcatcaccagccac
cccatcgaattcaccgacgatatcatcagcgtgtacgaagatacgccggagctggtgagt
ttcctgcacctgccggttcagagcggctccgaccgcgtactgaccatgatgaagcgccgc
cacaccgcgctggaatacaaggccatcatccgcaaactgcgtaaagcccgtccggcgatc
cagatcagttccgactttatcgtcggcttcccgggcgaaacgcaggaagatttcgagcag
accatgaaactgatcgccgatgtcgatttcgacatgagcttcagctttatctactcgcct
cgccccggcaccccggccgccgacatggtggacgacgtgaccgaagaagagaaaaaacag
cggctgtacattctgcaggaacgcatcaaccagcaggccatgcagtacagccgccggatg
atgggcacagtacaacgcattctggtcgaaggcacctcgcgcaagagcgtgatggaactg
tccggccgtactgaaaacaaccgcgtagtgaactttgaaggaacgcccgacatgatcggc
aaattcgtcgacgtggaaattgtcgacgtttacccgaactcgctgcgtggcgtggtaatc
cgtaccgaagatcaaatggatctgcgcgttagcgagtcgccgacgtcggttatcgctcgt
acccgtaaagagaacgagctcggcgttggcatctatcagccgtaa
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