Dickeya fangzhongdai DSM 101947: CVE23_06860
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Entry
CVE23_06860 CDS
T05277
Name
(GenBank) succinate dehydrogenase flavoprotein subunit
KO
K00239
succinate dehydrogenase flavoprotein subunit [EC:
1.3.5.1
]
Organism
dfn
Dickeya fangzhongdai DSM 101947
Pathway
dfn00020
Citrate cycle (TCA cycle)
dfn00190
Oxidative phosphorylation
dfn00650
Butanoate metabolism
dfn00720
Other carbon fixation pathways
dfn01100
Metabolic pathways
dfn01110
Biosynthesis of secondary metabolites
dfn01120
Microbial metabolism in diverse environments
dfn01200
Carbon metabolism
Module
dfn_M00009
Citrate cycle (TCA cycle, Krebs cycle)
dfn_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
dfn_M00149
Succinate dehydrogenase, prokaryotes
Brite
KEGG Orthology (KO) [BR:
dfn00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
CVE23_06860
00650 Butanoate metabolism
CVE23_06860
09102 Energy metabolism
00190 Oxidative phosphorylation
CVE23_06860
00720 Other carbon fixation pathways
CVE23_06860
Enzymes [BR:
dfn01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
CVE23_06860
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Gene cluster
GFIT
Motif
Pfam:
FAD_binding_2
Succ_DH_flav_C
HI0933_like
GIDA
Pyr_redox_2
DAO
Thi4
FAD_oxidored
FAD_binding_3
Motif
Other DBs
NCBI-ProteinID:
ATZ93725
UniProt:
A0A2K8QKY1
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Position
1478153..1479919
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AA seq
588 aa
AA seq
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MNLPVREFDAVVVGAGGAGMRAALQISQMGLSCALLSKVFPTRSHTVSAQGGITVALGNT
HEDNWEWHMYDTVKGSDYIGDQDAIEYMCKTGPEAILELEHMGLPFSRLDDGRIYQRPFG
GQSKNFGGEQAARTAAAADRTGHALLHTLYQQNLKNHTTIFSEWYALDLVKNQDGAVVGC
TAICIETGEVVYFKARATVLATGGAGRIYQSTTNAHINTGDGVGMALRAGVPVQDMEMWQ
FHPTGIAGAGVLVTEGCRGEGGYLLNKHGERFMERYAPNAKDLAGRDVVARSIMIEIREG
RGCDGPWGPHAKLKLDHLGKDVLESRLPGILELSRTFAHVDPVKEPIPVIPTCHYMMGGI
PTKVTGQALTVNEKGEDVVIPGLFAVGEIACVSVHGANRLGGNSLLDLVVFGRSAGMHLQ
ESLAEQGDTRDASDSDVDASLERLNRWNNTRSGEDPVEIRKALQACMQNNFSVFREGDAM
AKGLEELKVIRERLNNARLDDTSSEFNTQRIECLELDNLMETAYATAVSANFRTESRGAH
SRFDYPDRDDENWLCHSLYQPQTESMTRREVNMQPKLRPAFPPKVRTY
NT seq
1767 nt
NT seq
+upstream
nt +downstream
nt
atgaatttgccagtcagagagtttgatgccgttgtcgtcggcgcgggtggtgccggtatg
cgcgccgcgctgcagatttcccagatgggcctgtcctgcgccctgttatcaaaagtgttc
ccgactcgttcccataccgtgtccgctcagggcggaattaccgtggcgctgggtaacacc
cacgaggataactgggaatggcacatgtatgacaccgtgaaaggttccgactatatcggt
gaccaggacgcgattgaatatatgtgcaaaaccggtccggaggcgattctggaactggag
cacatggggctgccgttctcccgtctggatgacggccgcatttatcagcgcccgttcggc
ggtcagtccaagaatttcggcggcgagcaggctgcccgcaccgcggcggcggcggaccgt
accggtcacgcgttgctgcacacgctgtatcagcagaacctgaaaaaccataccacgatc
ttttccgaatggtatgcgctggatctggtgaaaaaccaggatggcgcggtggtgggatgt
accgccatctgcatcgaaaccggcgaagtcgtttatttcaaagcccgtgccaccgtactg
gcgaccggcggcgcaggccgtatctatcagtccaccaccaacgcccacatcaacaccggc
gacggcgtcggcatggcgttgcgcgccggcgtgccggtgcaggacatggaaatgtggcag
ttccacccgacggggatcgccggcgccggcgtgctggtgaccgaagggtgccgcggtgaa
ggcggttacctgctgaacaagcacggcgagcgtttcatggagcgctatgcgccgaacgcc
aaagatctggcggggcgcgacgtagtagcgcgttccattatgatcgaaatccgcgaaggc
cggggctgcgatggcccgtgggggccgcacgccaaactgaagctggaccatctgggcaag
gacgttcttgaatcccgtctgccgggcattctggaactgtcccgtacctttgcgcacgta
gacccggtgaaagagccgattccggttatcccgacctgccactacatgatgggcggtatt
ccgaccaaggtaaccggccaggcgctgaccgtgaacgagaagggcgaagacgtggtgatt
ccgggtctgttcgccgtgggcgaaatcgcctgcgtttccgtacacggcgccaaccgtctg
ggcggcaactcgctgcttgacctggtggtgttcggtcgttccgccggtatgcacctgcag
gaatctctggccgaacagggcgatacccgcgacgccagcgattccgatgtcgacgcctcg
ctggaacgtctcaaccggtggaacaatacccgttccggtgaggacccggtggagatccgc
aaggcgctgcaagcctgcatgcagaataacttctcggtattccgcgaaggcgacgcgatg
gcgaaagggctggaagagctgaaagtgatccgcgagcgtctcaacaatgcccgtctggac
gatacttccagcgagttcaacacccagcgcatcgaatgtctggagctggacaacctgatg
gaaaccgcttacgccaccgcggtatcggcaaacttccgcactgaaagccgtggtgctcac
agccgcttcgactatcctgatcgtgatgacgagaattggttgtgtcattcgctgtatcaa
ccgcaaaccgaaagcatgacgcgccgtgaggtgaacatgcagcctaaactgcgcccggcg
ttcccgccgaaagtgcgtacttattaa
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