Dickeya fangzhongdai DSM 101947: CVE23_10080
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Entry
CVE23_10080 CDS
T05277
Name
(GenBank) 30S ribosomal protein S1
KO
K02945
small subunit ribosomal protein S1
Organism
dfn
Dickeya fangzhongdai DSM 101947
Pathway
dfn03010
Ribosome
Brite
KEGG Orthology (KO) [BR:
dfn00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
CVE23_10080
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
dfn03011
]
CVE23_10080
Ribosome [BR:
dfn03011
]
Ribosomal proteins
Mitochondria/ Chloroplast
Small subunit
CVE23_10080
Bacteria
CVE23_10080
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
S1
S1_RRP5
Spt6_S1
PCB_OB
Motif
Other DBs
NCBI-ProteinID:
ATZ94283
UniProt:
A0A2K8QLA4
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All DBs
Position
2230992..2232701
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AA seq
569 aa
AA seq
DB search
MDVKFKNPKIINMTESFAQLFEESLKEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAI
PVEQFKNAQGEIEIQIGDEVDVALDAVEDGFGETLLSREKAKRHEAWLMLEKAYEESATV
TGVINGKVKGGFTVELNGIRAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVV
SRRAVIESENSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRV
KHPSEIVNVGDEITVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLT
DYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQ
CKANPWQQFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVRE
YKKGDEIAAVVLQVDAERERISLGVKQLAEDPFNNYLSVNKKGAIVTGKVTAVDAKGATV
ELADGVEGYLRASEASRDRIEDATLVLSVGDEIEAKYTGVDRKNRVVSLSIRAKDEADEK
DAIASVNNKQEEGNFSNAMAEAFKAAKGE
NT seq
1710 nt
NT seq
+upstream
nt +downstream
nt
atggacgttaaatttaaaaacccaaagattatcaacatgactgaatcttttgctcaactc
tttgaagaatccctgaaagaaattgaaacccgcccgggttccatcgttcgcggcgttgtg
gttgctattgacaaggacgttgtcctggttgatgccggcctgaaatctgaatctgccatt
ccggtagagcagttcaaaaacgctcagggtgaaattgaaatccagattggtgatgaagta
gacgtagctctggacgcggtagaagacggcttcggcgaaactctgctgtcccgtgaaaaa
gctaaacgtcacgaagcatggctgatgctggaaaaagcttacgaagaatctgccactgtt
accggtgttatcaacggtaaagtgaaaggcggtttcaccgttgagctgaacggtatccgt
gcgttcctgccgggttctctggttgatgtccgtccggtacgcgacaccctgcatctggaa
ggcaaagagcttgagttcaaagtgatcaagctggaccagaaacgcaacaacgttgttgtt
tcccgtcgtgccgttatcgaatccgaaaacagcgccgagcgcgatcagctgctggaaaac
ctgcaggaaggcatggaagtcaaaggtatcgtcaagaacctcactgactacggtgcattc
gttgatctgggcggcgttgacggcctgctgcacatcaccgacatggcctggaaacgcgtt
aagcatccgagcgaaatcgtcaatgtgggcgacgaaatcactgttaaagtgctgaagttc
gaccgcgaacgtacccgtgtctccctgggcctgaaacagctgggcgaagatccgtgggtc
gctatcgctaaacgctatccggaaggcaccaagctgactggccgcgtaaccaacctgact
gattacggctgcttcgtagaaatcgaagaaggcgttgaaggtctggtacacgtatctgaa
atggactggaccaacaaaaacatccatccgtccaaagtggttaacgtgggcgacgtggtg
gaagttatggttctggacatcgacgaagaacgtcgtcgtatctccctgggcctgaaacag
tgcaaagccaacccgtggcagcagttcgctgaaacccacaacaagggtgaccgcgtagaa
ggcaagatcaagtccatcactgactttggtatcttcatcggtctggatggcggtatcgat
ggtctggtgcacctgtctgacatctcctggaacgtagctggcgaagaagccgttcgcgaa
tacaagaaaggcgacgaaatcgctgctgtggttctgcaggttgatgccgagcgtgagcgt
atctccctgggcgtgaaacaactggctgaagacccgttcaacaactacctgtctgttaac
aagaaaggtgcaattgttacaggtaaagtcaccgcagttgacgctaaaggtgctacagtt
gaattagccgacggtgttgaaggttacctgcgcgcttctgaagcctctcgtgaccgcatc
gaagacgcaaccctggttctgagcgtgggtgatgagatcgaagccaaatacactggcgtt
gatcgcaaaaaccgcgttgtcagcctgtccatccgtgccaaggatgaagctgacgagaaa
gatgctatcgcttctgttaacaacaaacaggaagaaggcaatttctctaacgccatggcg
gaagctttcaaagctgcaaaaggcgagtaa
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