Dickeya fangzhongdai DSM 101947: CVE23_11500
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Entry
CVE23_11500 CDS
T05277
Name
(GenBank) 3-deoxy-8-phosphooctulonate synthase
KO
K01627
2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:
2.5.1.55
]
Organism
dfn
Dickeya fangzhongdai DSM 101947
Pathway
dfn00541
Biosynthesis of various nucleotide sugars
dfn01100
Metabolic pathways
dfn01250
Biosynthesis of nucleotide sugars
Module
dfn_M00063
CMP-KDO biosynthesis, ribulose-5P => CMP-KDO
Brite
KEGG Orthology (KO) [BR:
dfn00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
CVE23_11500
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
dfn01005
]
CVE23_11500
Enzymes [BR:
dfn01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.55 3-deoxy-8-phosphooctulonate synthase
CVE23_11500
Lipopolysaccharide biosynthesis proteins [BR:
dfn01005
]
Lipid A
CVE23_11500
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DAHP_synth_1
MjAgo_N-like
Motif
Other DBs
NCBI-ProteinID:
ATZ94547
UniProt:
A0A2K8QM01
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Position
complement(2557827..2558681)
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AA seq
284 aa
AA seq
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MNNKVVNIGDIPVANSLPFVLFGGMNVLESRDLAMRICEHYVAVTQKLGIPYVFKASFDK
ANRSSIHSYRGPGLEEGMKIFQELKQTFGVKIITDVHEPQQAQPVSEVVDVIQLPAFLAR
QTDLVEAMAKTGAVINIKKPQFISPGQVGNIVDKFREGGNEQVILCDRGSNFGYDNLVVD
MLGFNVMKQVSHGAPVIFDVTHALQCRDPFGAASGGRRAQVAELARAGMAVGIAGLFIEA
HPEPNSAMCDGPSALPLDKLEPFLQQMKAIDDLVKSFPELDTSN
NT seq
855 nt
NT seq
+upstream
nt +downstream
nt
atgaacaataaagtggttaacatcggagatatcccggttgccaactctctgccgtttgta
ctgtttggtggcatgaatgtgctcgaatcccgcgatctggcgatgcggatttgcgaacac
tatgtcgcggtaacgcagaaactgggcatcccctatgtcttcaaggcgtcttttgataag
gcgaaccgctcctccatccactcttaccgtggtccgggtctggaagaagggatgaagatt
ttccaggaactgaagcaaacttttggcgtgaaaatcattaccgacgtgcatgaaccgcag
caggcacaaccggtatccgaggtggtggatgtgattcagttgccggcgttcctcgctcgc
cagaccgatctggtggaagcgatggcgaaaaccggcgcggtcatcaacatcaaaaaaccg
cagttcatcagcccggggcaggtaggcaatatcgtggataaattccgcgagggcggcaac
gagcaggtaattctgtgcgatcgcggcagcaactttggttacgacaacctggtggtggat
atgctgggctttaatgtcatgaagcaggtttcccacggcgcgccggtgattttcgatgtg
acccacgcgctgcaatgtcgcgatccgttcggcgccgcgtctggcggacgccgtgcccag
gtggctgaactggcgcgtgccggtatggcggtcgggattgcggggctgtttattgaagcc
catccggagccgaatagcgccatgtgtgacggtccttccgctttgccgctggataaactg
gaaccgttcctgcagcagatgaaagcgatcgatgatctggtcaaaagcttcccggaactg
gataccagcaactga
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