Dickeya fangzhongdai DSM 101947: CVE23_11610
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Entry
CVE23_11610 CDS
T05277
Symbol
recD
Name
(GenBank) exodeoxyribonuclease V subunit alpha
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
dfn
Dickeya fangzhongdai DSM 101947
Pathway
dfn03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
dfn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
CVE23_11610 (recD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dfn03400
]
CVE23_11610 (recD)
Enzymes [BR:
dfn01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
CVE23_11610 (recD)
DNA repair and recombination proteins [BR:
dfn03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
CVE23_11610 (recD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
RecD_N
AAA_30
AAA_11
Viral_helicase1
UvrD_C_2
Helicase_RecD
AAA_22
SH3_13
UvrD-helicase
SLFN-g3_helicase
NTPase_1
AAA_28
T2SSE
nSTAND3
Mg_chelatase
Motif
Other DBs
NCBI-ProteinID:
ATZ94565
UniProt:
A0A2K8QND0
LinkDB
All DBs
Position
complement(2585567..2587612)
Genome browser
AA seq
681 aa
AA seq
DB search
MNMTSHDELTLLLDQWVGCGWLRELDRALVRFLHQECPDASPLLLLGAALVSYQLGRGHV
CLDLDATLADSGFSLALPPEGDRSENRKIARPAEVLAGVTLSAWQAALQQPQLVSSGEGC
TPLVLVGARLYLRRYWRYEQDVRHAITQQLKQNDALRAAIAPAALRQRLDALFPGDAADA
ANWQKLACALAAGSAFSIITGGPGTGKTTTVVKLLALLQSLALEQHGKPLRIRLAAPTGK
AAARLNESIAGAIAGLTLEGLAQGEAIREQINSEVVTLHRLLGSRPDTRHFRHHADNPLM
LDVLVVDEASMVDLEMMAALLAAMPARSRLILLGDKDQLASVEAGALMGELCQRAAQGHY
LPQTRDWLRQVAGEAPDDSLLDPQGSALDQSIAMLRHSYRFGAHSGIGQLAEAVNAGDVA
ALASIWQQGYADLAHLTLTANDNRTLREWVIDGAADRFGAQPSAATPVGYGGYLRRMAST
RPELTAPQSEFDLWAAQILDAFGQFQLLCALRNGPWGVDSMNERIAHLLYRDGLLAAWQG
WYPGRPVMVTRNDYSQRLMNGDIGITLQVPLLQPDGSRGWATRVAFPAGDGSSGIRWVLP
GRLSAVETVFAMTVHKSQGSEFAHTALLLPESLSPILTRELVYTGITRAKYAFSLGCVGE
HSTVLAEAVGRRVLRVSGLVE
NT seq
2046 nt
NT seq
+upstream
nt +downstream
nt
atgaacatgaccagtcatgacgaattaaccctgttgctggaccagtgggtgggctgcggc
tggttgcgggagctggaccgggcgctggtgcgcttcctgcatcaggaatgccctgatgcg
tcgcctttgctgctgctgggggcggcgctggtcagctatcagcttgggcgcgggcatgtg
tgcctcgatctggacgccacgcttgccgacagcgggttttcgctggcgttgccgccggaa
ggcgatcgtagcgaaaaccgtaagatcgcgcgtccggcggaggtgctggcgggcgttacc
ctgtcggcctggcaggcggcgttgcaacagccgcagttggtatcgtcgggggaaggctgc
acgccgctggtgctggtcggcgcgcgtctttatctgcgtcgctactggcggtacgagcag
gatgtgcggcacgccatcacgcagcaactgaaacaaaacgacgcgctgcgggcggcgata
gcgcctgcggcgctgcgtcagcggctggatgcgctgtttcctggcgacgcggccgacgct
gccaactggcagaaactggcctgtgcgttggcggcgggcagcgcctttagcattatcacc
ggcgggccgggcaccggaaaaaccaccaccgtggtgaaactgctggcgctgttgcaatcg
ctggcgctggaacagcacggcaaaccgttgcgtatccggctggcggcgcccaccggcaag
gcggcggcccgcctgaacgagtcgattgccggggccattgccggcctgacgctggagggg
ctggcgcagggcgaggctatccgggaacagatcaacagcgaagtggtgaccttgcaccgt
ttgctgggcagtcggccggatacccggcatttccggcaccatgccgataacccgctgatg
ctggatgtgctggtggtggacgaagcgtcgatggtggatctggagatgatggcggcgctg
ctggcggcgatgccggcccgttcccgcctgattctgctgggcgacaaggatcaattggcg
tcggtagaagccggcgcgttgatgggcgaactgtgtcagcgcgccgcacaggggcattac
ctgccacagacccgcgactggctacggcaggtcgcgggagaggcgccggacgattcgctg
ctcgacccgcaaggcagcgcgttggatcaatccatcgccatgctgcgccacagctatcgc
tttggcgcccacagcggcatcggccaactggcggaggcggtgaatgccggcgacgtggcg
gcgctggcgtcgatctggcagcaggggtatgccgacctggcgcacctgacgttgacggcg
aatgataaccgcacgctgcgtgaatgggttatcgacggcgccgccgatcgattcggcgcg
cagccctctgcggctacgccggtgggctacggcggctacctgcgacggatggcctcgacg
cggccggaactgacggcgccgcaaagcgagttcgacctctgggcggcgcagattctggac
gctttcggtcagttccaactgctgtgcgcattgcgtaacggaccgtggggcgtcgacagt
atgaatgagcgcatcgcccatctgctgtatcgggacggcttgctggcggcctggcaaggc
tggtatccggggcggccggtgatggtgacccgcaacgattatagtcagcggctgatgaac
ggcgatatcggcatcaccctacaggtgccgctgctccagccggacggctcacggggatgg
gctacccgggtggcgtttcccgccggcgatggctcatcgggcatccgctgggtgctgccg
gggcgattatcggcggtggaaacggtgttcgccatgacggtgcacaaatcgcaagggtcg
gaattcgcccacaccgctttactgctgccggagtccttaagcccgatcctgacccgcgaa
ctggtgtacaccggcattacccgcgccaaatacgcgttcagcctcggctgcgtgggggag
cacagtacggtgctggcggaagcggtcggtcggcgggtattacgggtaagcggactggtg
gaataa
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