Dickeya fangzhongdai DSM 101947: CVE23_11805
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Entry
CVE23_11805 CDS
T05277
Name
(GenBank) long-chain-fatty-acid--CoA ligase FadD
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
dfn
Dickeya fangzhongdai DSM 101947
Pathway
dfn00061
Fatty acid biosynthesis
dfn00071
Fatty acid degradation
dfn01100
Metabolic pathways
dfn01212
Fatty acid metabolism
dfn02024
Quorum sensing
dfn04146
Peroxisome
Module
dfn_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
dfn00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
CVE23_11805
00071 Fatty acid degradation
CVE23_11805
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
CVE23_11805
09145 Cellular community - prokaryotes
02024 Quorum sensing
CVE23_11805
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
dfn01004
]
CVE23_11805
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
dfn04147
]
CVE23_11805
Enzymes [BR:
dfn01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
CVE23_11805
Lipid biosynthesis proteins [BR:
dfn01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
CVE23_11805
Exosome [BR:
dfn04147
]
Exosomal proteins
Exosomal proteins of breast milk
CVE23_11805
Exosomal proteins of breast cancer cells
CVE23_11805
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
AMP-binding_C_2
Pept_S41_N
Motif
Other DBs
NCBI-ProteinID:
ATZ94597
UniProt:
A0A2K8QM52
LinkDB
All DBs
Position
complement(2641970..2643673)
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AA seq
567 aa
AA seq
DB search
MPLKKYLGSDVLEKIWLARYPADVPAEIDPDRYASLIELFEHAVARYADQPAFINMGEVM
TFRRLEERSRAFAAYLQHQLKLKKGDRVALMMPNLLQYPIALFGVLRAGLVVVNVNPLYT
PRELEHQLKDCGASAIVIVSNFAHTLEKVVYNTPVKHVILTRMGDQLAPAKGTLVNFVVK
YIKRLVPKYHLPDAISFRQVLQQGKRMPYVKPEVNNQDLAFLQYTGGTTGVAKGAMLTHR
NMQANLMQARAAYGPVLQEGQELVVTALPLYHIFALTVNCLLFVEIGGKNLLITNPRDIP
GMIKELTHYPFTAITGVNTLFNALLNNAAFSRLDFSTLRLSVGGGASVQQVVAERWEKLT
GIHLLEGYGLTESAPLVAGNPYDLQHYSGSIGLPVPSTDVRIVNDDGQDVAPGEPGELWV
RGPQVMSGYWQQPAATHDVLKEGWLATGDIVTADEQGFLKIVDRKKDMILVSGFNVYPNE
IEEVVARHPKVSEAAAIGVPSETSGEAVKVFVVCRDPSLTVEELISHCRRNLTGYKVPRL
FEFRAELPKSNVGKILRRELRNEQSAA
NT seq
1704 nt
NT seq
+upstream
nt +downstream
nt
atgccacttaaaaaatatctcgggagtgacgttttggaaaaaatctggttagcgcgttat
ccggcggatgtccccgcggaaattgacccggatcgctacgcttcgctaatcgagttgttt
gaacacgcggtggcgcgttatgccgaccagcccgcctttatcaatatgggcgaggtgatg
accttccgtcggctggaggagcgcagccgcgcttttgccgcttacctgcagcatcagttg
aaactgaaaaagggcgatcgcgtcgcgttgatgatgccgaacctgctgcagtatccgatc
gcgctattcggcgtcctgcgggccggtctggtggtggtcaacgtcaatccgctgtatacg
ccgcgcgagctggagcaccagttgaaagactgcggtgcttcggccatcgttatcgtctcc
aattttgcccatacgctggaaaaagtggtttacaacaccccggtgaaacatgtgatcctg
acccgcatgggcgatcaactggcgccggccaaaggcacgctggtcaacttcgtggtcaag
tacatcaagcgtctggtgccgaaatatcacctgccggacgccatttcgttccgtcaggta
ctgcagcagggcaaacggatgccgtatgtgaagccggaggtgaacaatcaggatctggcg
ttcctgcaatataccggcggcaccaccggcgtcgccaagggagcgatgctgactcaccgg
aatatgcaggccaatctgatgcaggccagagcggcttatggcccggtattgcaggaggga
caggagttggtggtgacggcgctgccgctctatcacatttttgcactgacggtgaattgc
ctgttgtttgtcgaaatcggtggaaaaaacctgctgatcaccaacccgcgcgatattccc
ggcatgatcaaagagcttacgcactacccgtttaccgccattaccggggtgaatacgctg
ttcaacgccttgctgaataacgccgcgtttagccggctggatttctccacgctgcggctg
tcggtaggcggcggcgcatcggtgcaacaggtggtggccgagcgctgggaaaaactgacc
ggcattcatctgctggaaggctatggattgacggaaagcgcgccgctggtggcgggaaat
ccgtatgatctgcaacattacagcggcagcatcggcttgccggtgccgtccaccgatgtg
cgtatcgtcaatgatgacggtcaggatgtggcgcccggcgaacccggcgaattgtgggtg
cgcggccctcaggtgatgtccggctactggcagcagcctgccgcgactcacgacgtgctg
aaagagggctggctggcgaccggtgacattgtcacggcggacgagcaggggttcctgaaa
atcgtcgaccgtaaaaaagacatgattctggtgtccggcttcaatgtttatcccaatgaa
atcgaggaagtggtggcgcgccatccgaaggtatccgaagcggcggcgattggcgtgccc
agcgaaacgtcgggcgaagcggtcaaagttttcgtggtgtgccgcgatccctcgctgacg
gtggaggagctgatcagtcactgccgtcgtaacctcaccgggtataaggtgccgcggcta
ttcgaattccgcgccgagttaccgaagtccaacgtgggaaaaattctccggcgtgagctg
cgtaatgagcagtcagccgcctga
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