Dickeya fangzhongdai DSM 101947: CVE23_12035
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Entry
CVE23_12035 CDS
T05277
Name
(GenBank) oligogalacturonate lyase
KO
K01730
oligogalacturonide lyase [EC:
4.2.2.6
]
Organism
dfn
Dickeya fangzhongdai DSM 101947
Pathway
dfn00040
Pentose and glucuronate interconversions
dfn01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
dfn00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
CVE23_12035
Enzymes [BR:
dfn01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.6 oligogalacturonide lyase
CVE23_12035
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Motif
Pfam:
Pectate_lyase22
PD40
Tricorn_N
Motif
Other DBs
NCBI-ProteinID:
ATZ94640
UniProt:
A0A2K8QPI7
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Position
complement(2689202..2690368)
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AA seq
388 aa
AA seq
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MAKGKKLSFSFHTYQDSVTGTEVVRLTPPDVICHRNYFYQKCFSNDGSKLLFGGAFDGPW
NYYLLDLKTQQATQLTEGTGDNTFGGFLSPDDDALYYVKNVRNLMRVDLKTLEETNIYQV
PDDWVGYGTWVANSDCTKMVGIEIKKEDWKPLTDWKKFQEFYFTNPCCRLIRIDLKTGEA
TTILQENQWLGHPIYRPGDDNTVAFCHEGPHDLVDARMWFINEDGTNMRKVKEHAAGESC
THEFWVPNGSALAYVSYLKGSTNRFICSVDPVTLENRQLTEMPPCSHLMSNYDGTLMVGD
GCNAPVDVKDDGGYKIENDPFLYVFNMKTGKHFQVAQHNTSWEVLEGDRQVTHPHPSFTP
DDKHILFTSDVDGKPALYLAKVPDSVWQ
NT seq
1167 nt
NT seq
+upstream
nt +downstream
nt
atggccaaaggtaaaaagctttctttttcgttccatacctaccaggattcagtcaccggc
accgaagtggtgcgtctcactcctcccgatgttatctgccaccgcaactacttctatcag
aagtgtttttccaatgatggcagcaagctgctgtttggtggcgcctttgacgggccgtgg
aactactatttgctggatctgaaaacccagcaggcaacgcagttgaccgaaggcaccggc
gacaatacgttcggcggtttcctgtctccagatgatgatgcgctgtattatgtgaagaac
gttcgtaatctgatgcgcgttgacctgaagacactggaagaaaccaatatttatcaggtg
ccggacgattgggtcggctacggtacctgggttgccaattccgattgcaccaaaatggtc
ggcatcgagattaagaaagaggattggaaaccgctgaccgactggaaaaaattccaggaa
ttctactttaccaacccatgctgccgtttgattcgtatcgatctgaaaaccggcgaagcc
accaccatcctgcaggaaaaccaatggctgggtcatcccatttatcgtccgggcgacgat
aatacggtggcgttctgccatgaaggcccgcatgacctggttgatgcgcgtatgtggttc
atcaatgaagacggcaccaatatgcgtaaggtgaaagaacatgcggcgggtgaaagttgc
acccacgagttctgggtgccgaatggttctgcgctggcttatgtttcctatctgaaaggc
agcaccaaccgcttcatttgcagtgtcgatccggtaacgctggaaaaccgtcagttgact
gaaatgccgccgtgttctcacctgatgagcaactacgatggcacgctgatggtgggagat
gggtgtaatgcgccggtggatgtgaaagatgacggtggctacaaaattgaaaacgatccg
ttcttgtatgtgttcaatatgaagaccgggaaacatttccaggtcgcgcaacacaacacc
tcgtgggaagtgctggagggcgaccgtcaggtaacgcatccgcacccgtccttcacgccg
gatgacaaacatattctgtttacgtctgatgtcgatggcaagccggcgttatatctggca
aaagtgcctgattcggtctggcaataa
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