Entry |
|
Name |
(GenBank) cystathionine beta-lyase
|
KO |
|
Organism |
dfn Dickeya fangzhongdai DSM 101947
|
Pathway |
dfn00260 | Glycine, serine and threonine metabolism |
dfn00270 | Cysteine and methionine metabolism |
dfn01110 | Biosynthesis of secondary metabolites |
|
Module |
dfn_M00338 | Cysteine biosynthesis, homocysteine + serine => cysteine |
|
Brite |
KEGG Orthology (KO) [BR:dfn00001]
09100 Metabolism
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
CVE23_12345
00270 Cysteine and methionine metabolism
CVE23_12345
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
CVE23_12345
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
CVE23_12345
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:dfn04147]
CVE23_12345
Enzymes [BR:dfn01000]
4. Lyases
4.4 Carbon-sulfur lyases
4.4.1 Carbon-sulfur lyases (only sub-subclass identified to date)
4.4.1.1 cystathionine gamma-lyase
CVE23_12345
Exosome [BR:dfn04147]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
CVE23_12345
|
SSDB |
|
Motif |
|
Other DBs |
|
LinkDB |
|
Position |
2767772..2768926
|
AA seq |
384 aa
MSHFDTLTVHAGYTPDSTGAVMPAIYATSTFAQPAPGQHTGYEYSRSGNPTRHALEANIA
ALEGGIQGFAFASGLAASATVLELLDQGSHIVAVDDIYGGTWRLLDRVRKRTAGLSVTYV
DPADLTTLEQAITPQTRMIWVETPTNPLLKLADLRAIAELAQRRGVISVADNTFASPALQ
RPLDLGFDIVVHSATKYLNGHSDVVAGLAVVGRGQELAAQLAFLQNAVGGVLDPFSSFLT
LRGIRTLALRLARHSDNALTLARWLEQQPQVEQVYYPGLPSHPQHALARRQMSAFGGMIS
VRLHGDADYAGAVIKRTRLFTLAESLGGVESLISQPFNMTHASLPLEQRLRLGITPQLLR
LSVGIENVEDLIADIRQALTGQTA |
NT seq |
1155 nt +upstreamnt +downstreamnt
atgagccatttcgataccctgaccgttcacgccggctacacgccggacagcaccggcgcg
gtgatgcccgccatttacgccacctccaccttcgcccagccggcgcccggccagcacacc
ggctacgagtactcacgcagcggcaacccgacccgccacgcgctggaagccaatatcgcc
gcgctggaaggcggcattcagggctttgccttcgcctccgggctggcggccagcgccacg
gtactggaactgctcgatcagggcagccacatcgtcgcggtggatgatatttacggcggc
acctggcgattgctggaccgggtgcgcaagcgtaccgccggactgagcgtcacctacgtc
gacccggccgacctgaccacgctggagcaggctatcaccccgcaaacccgcatgatctgg
gtagaaacgcccaccaatccgctgctgaaactggccgacctgcgcgccatcgccgaactg
gcccagcgccgtggcgtgatcagcgtggcggacaacaccttcgcctccccggccttgcag
cggccgctggatctgggcttcgatatcgtggtgcactcggccaccaagtatctgaacggc
cactcggatgtggtcgccgggctggcggtagtcgggcggggccaggagctggcggcgcaa
ctggcgtttttgcagaatgcggtgggcggggtactcgatccgttcagcagcttcctgacg
ctgcgcggtattcgcacgctggcgctgcgccttgcccgccatagcgacaacgcgctgacg
ctggcgcgctggctggagcagcaaccgcaggtggagcaggtgtactatcccggcctgccg
tctcacccgcagcatgcgctggcgcgtcggcaaatgagcgcgttcggcggcatgataagc
gtcaggctgcacggcgacgccgactacgccggcgcggtgattaagcgcacccggctgttt
acgctggcggaaagtctgggcggagtcgaaagcctgatcagccagcccttcaacatgacc
cacgcttccttgccgctggaacagcgcctgcgcctcggcatcacgccgcagttgctgcgt
ctgtcggtcggcatcgaaaacgtggaagacttgatcgccgatatccggcaggcgttaacc
ggccagacggcgtaa |