Dickeya fangzhongdai DSM 101947: CVE23_12995
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Entry
CVE23_12995 CDS
T05277
Name
(GenBank) oligopeptide ABC transporter substrate-binding protein OppA
KO
K15580
oligopeptide transport system substrate-binding protein
Organism
dfn
Dickeya fangzhongdai DSM 101947
Pathway
dfn01501
beta-Lactam resistance
dfn02010
ABC transporters
dfn02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
dfn00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
CVE23_12995
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
CVE23_12995
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
CVE23_12995
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
dfn02000
]
CVE23_12995
Transporters [BR:
dfn02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Oligopeptide transporter
CVE23_12995
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
SBP_bac_3
Motif
Other DBs
NCBI-ProteinID:
ATZ94817
UniProt:
A0A2K8QMR4
LinkDB
All DBs
Position
complement(2910888..2912519)
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AA seq
543 aa
AA seq
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MQFRYSAVSVGVVSAVLMIALIIPAGAAQVPPGAVLADRQEIVRHIKDEPASLDPIKAVG
LPEIQVIRDLFEGLVNQDAQGNPIPGVAQRWQTNDNRTFIFTLRPDARWSNGDPVTAKDF
VYSWRRLATPQNTSPFSWFIRLAGIVNADDILAGKLPADKLGVIAVDDHTLKVQLSKPVP
YFISLMANFSLYPVHQATVEKYGNEWIKPGNLVGNGAFVLKDRVVNEKLVLVPNSHYWDH
ANTRLTQVTFVPINQESNATKRYQAGDIDITESFPKNQYQKLLKDLPGQIFTPDQLGTYY
YAFNTQRAPTNDVRVRKALSYAIDRKIIAGKVLGTGEKPAYRFTPDVTAGFKPQPGQLQQ
YSQAELDMQAKALMAAAGYGPSKPLKLTLLYNTQEVHQKIAIAVASMWKTKLGVDVKLVN
QEWKTYIDSRNTGNFDVIRASWVGDYNEPSTFLSLLTASHSGNIARFNNADYDRLMADTA
GQTDRKILTEDYNRAEQILAEQAPIAPIYQYTNGRLIKPWVKGYPITNPEDVAYSQTLYI
LKH
NT seq
1632 nt
NT seq
+upstream
nt +downstream
nt
atgcaatttcgttattccgcagtttccgtgggcgtggtttccgccgtgctgatgatagcc
ttgataatcccggcgggcgcggcgcaggttcctcccggcgccgttctggcggaccgacag
gagatcgtccgtcatatcaaggatgaaccggcttcgctggacccgattaaagcggttggt
ttgccggagattcaggtgattcgcgacctgttcgaagggctggtgaatcaggacgcgcag
ggtaacccgattcccggcgtcgcccagcgctggcagactaacgataaccgcaccttcatt
tttactctgcgccctgatgcgcgctggtcgaacggcgatccggtcaccgctaaagatttt
gtctacagctggcggcgactggcgacgccgcaaaatacctcgccgtttagctggtttatc
cggctggcggggatcgtcaatgctgatgatatcctggccggcaagctgcccgccgacaag
ctgggcgtcattgcggttgacgatcacacgttaaaggtgcaactgagtaagccggtgcct
tatttcatcagtctgatggctaatttcagcctttatccggtgcatcaggccacggtggaa
aaatacggcaatgagtggatcaaaccgggcaatctggtgggtaacggcgcattcgtgctc
aaagatcgggtggtcaatgaaaaactggtgctggtgccgaatagccattactgggatcac
gccaatacccggctgacgcaggtcacctttgtgccgatcaatcaggaatccaacgccacc
aagcgctatcaggccggtgatatcgacatcaccgagtcgtttcccaagaatcagtaccag
aaactgctgaaggatctgccggggcagatctttaccccggaccagctcggtacttactac
tatgcgttcaacacgcagcgcgcgccgaccaacgacgtgcgggtacgcaaggcgctgtct
tatgccatcgaccgtaagattatcgccgggaaagtgttgggaaccggcgagaaaccggcc
tatcgctttacgccggatgtcaccgccgggttcaaaccgcagccggggcaactgcagcag
tattcgcaggccgaactggatatgcaggccaaagcgttgatggcggcggccgggtatggt
ccgtccaaaccgctgaaactgacgctgctgtacaatacgcaggaagtgcatcaaaaaatc
gccatcgccgtcgcgtcgatgtggaaaaccaagctcggcgtagacgtgaaactggtgaat
caggaatggaaaacctacatcgacagccgcaatacggggaattttgatgtcatacgcgcc
tcctgggtcggcgattacaacgagccgtctaccttcctgtcgctgctgaccgccagtcat
agcggcaatatcgcccgtttcaacaacgccgattatgatcgactgatggcggataccgcc
gggcagactgaccgaaagatactgaccgaggattacaaccgcgccgagcagattttggcg
gagcaggcgccaattgcgccgatttaccagtacaccaacgggcggttgattaaaccctgg
gtgaaagggtatcccatcactaaccctgaggatgttgcctacagccagacgctctatatt
ttgaaacactga
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