Dickeya fangzhongdai DSM 101947: CVE23_13670
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Entry
CVE23_13670 CDS
T05277
Name
(GenBank) L,D-transpeptidase
KO
K21470
L,D-transpeptidase YcbB
Organism
dfn
Dickeya fangzhongdai DSM 101947
Brite
KEGG Orthology (KO) [BR:
dfn00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
dfn01002
]
CVE23_13670
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
dfn01011
]
CVE23_13670
Peptidases and inhibitors [BR:
dfn01002
]
Cysteine peptidases
Family C82
CVE23_13670
Peptidoglycan biosynthesis and degradation proteins [BR:
dfn01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
CVE23_13670
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Gene cluster
GFIT
Motif
Pfam:
YkuD
Scaffold
PG_binding_1
Motif
Other DBs
NCBI-ProteinID:
ATZ94935
UniProt:
A0A2K8QPC8
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Position
complement(3091407..3093095)
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AA seq
562 aa
AA seq
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MLLVKRNTQRLLLGVASSIWLGSLLTSFSAQAASPIAPGSAVSSAASKSHTSVTAGLPAG
ISPHYLGELTALYTRQHMQPMWSDSHVVKAFQQQLAEVALSGIQPQFTTWVTWLTDPKLN
GFARDVVLSDAMLGYMQFVAGVEKNGNSWLYSSVPYKLAMPSAEMIEQWQRAVASGNGLA
FIASLAPRHSQYAKMHDALKNMLTDNRPWPKLILADSLRPGDESNALPVLKEILLRTGML
NQDGAAMPLFNEASSGDTSPLRYDGAVVDAVKRFQHSQGLQDDGVIGKRTRDWLNVSSQM
RATLLALNIQRLRLVPDKVSSGIVVNIPNYSLSYYQNGAEILSSKVIVGQPKRKTPLMNS
SLSNVVMNPPWNVPTTLTRQDIIPKVIQDPGYLQRHGYTVLSDWTESAQPIDPSMIDWPM
VSASNFPYRLRQAPGDSNSLGRYKFNMPNTDAIYLHDTPNHNLFQRDIRALSSGCVRVNK
ASELAALLLQDAGWNNARISSTLEQGNTTYVAVRQRVPVNFYYLTAWVADDGKPQFRTDI
YNYDDTVKTGALALSKVGLLLQ
NT seq
1689 nt
NT seq
+upstream
nt +downstream
nt
atgttgttagtcaaacgaaatacacaaagactgcttctgggggtagccagctcgatttgg
ctgggtagtctgttgacttcgttttccgctcaggcggcttcgccgattgcaccgggcagt
gcagtgtcatcggccgcgtcaaaaagtcatacctctgttaccgctggtttgcccgccggt
atttcacctcattatcttggcgaattgaccgcgctttatacgcgccagcacatgcaaccg
atgtggagcgacagccacgtcgtcaaagcgtttcagcagcaactggcggaagtcgcgctt
tccggtattcaaccgcaattcactacctgggtcacctggctgaccgacccgaaattaaac
ggttttgcccgtgatgtggtgctgtcggacgccatgctcgggtacatgcagtttgtcgcc
ggggtggagaaaaacggcaacagctggttgtacagcagtgttccctataagttggctatg
ccatcggcggagatgattgagcagtggcagcgggcggttgcatcgggcaacgggctggcg
tttattgcatcgctggcgcctcgtcattcccagtatgcaaaaatgcacgacgcgttgaaa
aacatgctgacggacaaccgtccctggccgaaacttatactggcggactcattgcgtccc
ggcgatgaaagcaacgcgttaccggttttaaaagagattctgctgcgaaccggcatgttg
aatcaggatggtgccgcgatgccgctgtttaatgaggcgtcatcaggtgatacatcgccg
ctgcgttatgacggagcggttgtggatgcggtgaaacgcttccagcactcgcaagggctg
caggatgacggcgtgattggtaaacgaacccgcgactggctcaatgtctcttcgcagatg
cgcgctacgttgctggcgttgaatatccagcgcctgcggctggtgccggacaaggtcagc
agcggcatcgtggtcaatattcccaactactcgctcagttactatcagaatggcgcggag
attttgtcgtcaaaggtgattgtcggtcagcctaaacgcaagacgccgctgatgaacagt
tcgctgagcaatgtggtgatgaatccgccgtggaacgtgcctaccacgcttacccgtcag
gacatcattcctaaggtgattcaggacccggggtatctgcagcgccacggttataccgta
ctgtcagactggaccgaaagcgctcagccgattgatccttcgatgatcgattggccgatg
gtttcggccagcaacttcccgtaccgcctgcgtcaggcgccgggggacagcaattcgctg
gggcgttataagttcaatatgccgaatacggacgccatctacctgcatgatacgcctaac
cataatttgtttcagagagatatccgggcgctgagttcgggatgtgtgcgtgttaacaag
gcatcggaattggcggcactgttattgcaggatgccggctggaacaatgcccgtatttcg
tcaacccttgagcagggcaacaccacttatgtggcggtgcgccaaagagtaccggtgaat
ttttactacctgactgcctgggtggctgatgatggcaaaccgcagttccgcacagatatt
tacaattatgatgatacggtgaaaaccggcgcgctggctttgtctaaggttggattatta
ttacagtaa
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