Dickeya fangzhongdai DSM 101947: CVE23_13835
Help
Entry
CVE23_13835 CDS
T05277
Symbol
holB
Name
(GenBank) DNA polymerase III subunit delta'
KO
K02341
DNA polymerase III subunit delta' [EC:
2.7.7.7
]
Organism
dfn
Dickeya fangzhongdai DSM 101947
Pathway
dfn03030
DNA replication
dfn03430
Mismatch repair
dfn03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
dfn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CVE23_13835 (holB)
03430 Mismatch repair
CVE23_13835 (holB)
03440 Homologous recombination
CVE23_13835 (holB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
dfn03032
]
CVE23_13835 (holB)
03400 DNA repair and recombination proteins [BR:
dfn03400
]
CVE23_13835 (holB)
Enzymes [BR:
dfn01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CVE23_13835 (holB)
DNA replication proteins [BR:
dfn03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
CVE23_13835 (holB)
DNA repair and recombination proteins [BR:
dfn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
CVE23_13835 (holB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNApol3-delta_C
DNA_pol3_delta2
HolB_lid
Motif
Other DBs
NCBI-ProteinID:
ATZ94965
UniProt:
A0A2K8QPF6
LinkDB
All DBs
Position
complement(3129354..3130364)
Genome browser
AA seq
336 aa
AA seq
DB search
MEWYPWLNAPYRQLLASHQAERGHHALLLHAIDGMGDASLAYAFSRWLLCQQPDGAKSCG
RCHSCELMNAGTHPDWHTLSPEKGKHSLGVDAVRDALEQVYQRSRQGGAKVVWLPQAESL
TEAAANALLKTLEEPPAQTYFLLGCREPGRLLATMRSRCLHLYLDVPAEPQGMQWLRGRG
HHDELALQTALRLAAGAPLAAEALLQPDSWKARQAVCQQLAQSLQSSDALALLPVLNHDD
ADRRIHWVSTLLLDALKWRHQAADQRTNLDQAPLAAQLASQLGDARLHHGLRRWLHCRHQ
LLSVTGVNRELLLTELLLAWESLLSSPTLPVSSSFS
NT seq
1011 nt
NT seq
+upstream
nt +downstream
nt
atggagtggtatccttggctgaatgcgccttaccgccagttgctggcgtcgcatcaggcg
gagcgcggccatcatgcgctgttgctgcatgctatcgacggtatgggcgacgcctcgctg
gcgtacgcattcagccgctggctgctgtgtcagcagccggatggcgcaaagagctgcgga
cgctgccactcctgtgagttgatgaacgccggcacccatccggactggcataccctcagc
ccggaaaaaggtaagcacagtctgggcgttgacgcggtgcgcgatgcgttagagcaagtg
taccagcgctcgcggcagggtggtgcgaaggtggtttggctgccgcaggcggaaagcctg
accgaagcggcggccaatgcgctgctgaagacgttggaagagccgccggcgcaaacctat
tttctgctgggatgccgcgaaccgggacggttgctggcgacgatgcgcagtcgctgcctg
catttgtacctggatgtgccggctgagccgcaagggatgcaatggctgcgcggacgcgga
catcatgatgagctggcgctgcagaccgcgttgcgactggcggcgggggcgccgctggcc
gctgaagcattgctgcagccggatagctggaaagcgcgtcaggcggtttgccagcagctg
gcgcagagcctgcagtccagtgatgcgctggcgctgttgccggtactcaatcatgatgac
gccgatcgtcgtattcactgggtgagtacgctgttgctggatgcgctgaaatggcgccat
caggctgccgatcagcggaccaacctggatcaggcgccgctggcggcgcaattggcgtca
cagcttggcgacgcccgcctgcaccacggcctgcggcgctggctacactgtcgtcaccaa
ctgttgtcggtgacgggcgttaaccgcgaattgttattgacggaactgttgctggcgtgg
gagagcctgttgtcgtctccgacgctgccggtgtcgtcatctttttcctga
DBGET
integrated database retrieval system
