Dickeya fangzhongdai DSM 101947: CVE23_14515
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Entry
CVE23_14515 CDS
T05277
Symbol
nirD
Name
(GenBank) nitrite reductase (NAD(P)H) small subunit
KO
K00361
nitrite reductase [NAD(P)H] [EC:
1.7.1.4
]
Organism
dfn
Dickeya fangzhongdai DSM 101947
Pathway
dfn00910
Nitrogen metabolism
dfn01100
Metabolic pathways
dfn01120
Microbial metabolism in diverse environments
dfn01310
Nitrogen cycle
Module
dfn_M00531
Assimilatory nitrate reduction, nitrate => ammonia
dfn_M00615
Nitrate assimilation
Brite
KEGG Orthology (KO) [BR:
dfn00001
]
09100 Metabolism
09102 Energy metabolism
00910 Nitrogen metabolism
CVE23_14515 (nirD)
Enzymes [BR:
dfn01000
]
1. Oxidoreductases
1.7 Acting on other nitrogenous compounds as donors
1.7.1 With NAD+ or NADP+ as acceptor
1.7.1.4 nitrite reductase [NAD(P)H]
CVE23_14515 (nirD)
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Ortholog
Paralog
GFIT
Motif
Pfam:
Pyr_redox_2
Pyr_redox
Rieske_2
Rubredoxin_C
NIR_SIR
Fer2_BFD
NIR_SIR_ferr
Pyr_redox_3
NAD_binding_8
DAO
GIDA
AlaDh_PNT_C
FAD_binding_3
3HCDH_N
Lys_Orn_oxgnase
FAD_binding_2
Hera_DD
Motif
Other DBs
NCBI-ProteinID:
ATZ95084
UniProt:
A0A2K8QNL7
LinkDB
All DBs
Position
complement(3272271..3276443)
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AA seq
1390 aa
AA seq
DB search
MSAHLVIIGNGLSSARLVKRLGQLAPQRYRVTVIDREPRDSYNRVLLSSVLGGEKTFEDT
QLEPAPATMDVTILTGESALRIDRATREVITDRRRLTYDQLVFATGSRPFMPPLPGIDLP
GVMGFRTLDDVERMWAAVRQGKPAVVIGGGLLGIEAAAALRLQGAAVTLLHRHARLMERQ
LDATASDLLCARLHERGIRCLTGVQIQALSGNELSGNKSSDGEQVEAVELADGTRLPAGL
VVVATGVQPVCELARDSGLACGRGILADGQLRTADEYVSAFGECAEVKGETVGLVAPCLA
QADVLAARLAGQPVADYAPAALATRLKVTGIDVVSAGELHPQEGDRLHSLSDPLGGHYRR
LIFRDDRLCGALLFGHVSDSPQLLAAMETRLPSAPSSLLFGLSFPEVDIRPAAVRISVMS
KPVLVVVGHGMVGHHFLEQLVERSLHQQYHVVVFGEERHPAYDRVHLSEYFAGRSAESLS
MVSEGFFEQHDIELRTGCQVTEIDRQRRCVRDANGQETPYDRLVLATGSYPFVPPMTGND
RPGCLVYRTLEDLDAIAAEARESRSGVVVGGGLLGLEAANALRQLGLETHVVEFAPRLMA
VQLDDGGAQLLKRKIEALGLQVHTGKETRAITAGEQARHRMNFADGTALETDLVLFSAGI
RPRDQLARDAALEIGARGGIVIDDYCQTSDDAIFAIGECALWQGQMFGLVAPGYQMARTV
AARLAQQEQSFTGADMSTKLKLLGVDVASIGDAHGKTEGSLSYQWNDEPNQVYKKIIVSA
DGKRLLGAVLVGDSSDYSTLLQMKLNDMTLPAHPESLILPALDGAAPKGLGVAALPDSAQ
ICSCHNVSKADICAAVDNGCTDLASLKACTKAGTGCGGCVPLLKQVMEYQLQQSGIEVKK
DICEHFAYSRQELYHLIRVNRIRSFGELIARHGHGLGCEICKPLAGSMLASCWNDYVLKP
EHVPLQDTNDRFLANIQKDGTYSVVPRIPGGEITPQGLIAIGQVAERYHLYTKITGGQRV
DLFGARLEQLPAIWQELIDAGFETGHAYGKSLRTVKSCVGSTWCRYGVQDSTSLAIALEH
RYKGLRSPHKLKMAVSGCTRECAEAQGKDIGVIATDKGWNLYVCGNGGMKPRHADLFASD
LDTDTLFRLIDRLLMFYIRTGDRLQRTSVWLDNLEGGIDYLRQVVIDDSLGIADELENEM
RQVIDSYQCEWQTTLAHDEHRALFRAFLNSDTPDEAVVMVPERGQPRPARLEEKTTAASE
AAGVEGWQCVGFLCDIPANAGMAARVGHQQVALFHLPAAQPGQAGHVFALDNQEPGSGAN
VLSRGLVGDVAGEPVVISPLYKKRLRLRDGVSPDDSQLRVRAWPVRVVQDRIWVANEPMA
VAAADMAEAL
NT seq
4173 nt
NT seq
+upstream
nt +downstream
nt
atgagcgcgcatctggtgattatcggcaacggtctgtccagcgcgcggctggtaaagcga
ctggggcaactggcgccgcaacgctaccgcgtcaccgtcatcgatcgcgagccgcgcgac
agctataaccgcgtgctgctttcctcggtgctggggggcgaaaaaacctttgaggacacg
cagttagagccggcgccggcaacgatggacgtgaccatactgaccggcgagtcggcgcta
cgtattgatcgggctacgcgggaagtgattaccgatcgccgtcgcctgacctatgaccaa
ctggtgttcgccaccggttcccgcccgtttatgccgccgttgccgggcatcgacctgccg
ggcgtgatgggctttcgcacgctggatgacgtcgagcggatgtgggcggcggtgcgacag
ggaaagccggcggtggtgatcggcggcggattactggggattgaagccgccgccgcgctg
cgattgcagggtgccgcggtgacgctgctgcaccgccacgcccggctgatggagcgtcag
ctcgacgccaccgccagcgacctgttgtgcgcccggctgcatgagcgcggcatccgttgc
ctgaccggcgtgcagattcaggcattatccggtaacgaattgtccggtaataaatcgtcc
gacggcgagcaggtagaggcggtcgaactggcggacggtacgcgcttgcctgctggtctg
gtggtggtggcgaccggcgtgcagccggtgtgtgagctggctcgcgacagcggcctggcg
tgcgggcgcggcattctggccgacggccagttgcgcaccgccgatgaatacgtcagcgca
ttcggcgagtgcgctgaagtgaagggtgaaacggtcgggctggtggcgccctgtctggcg
caggccgatgtgctggccgcccggctggcggggcaaccggtggcggattacgcgccggcg
gcgctggccacccgactgaaagttaccgggattgacgtggtgagcgcgggggagttgcac
ccgcaggagggcgatcgactccactcgctgtcagacccgctcggcggccattatcgccgc
ctgatattccgcgacgaccggttatgcggcgcgctgctgttcggtcatgtcagcgacagt
ccgcaactgctggcggccatggagaccaggctgccatcggcaccgtcgtcgcttttgttt
ggtctgtcttttcctgaagtagacatacggcctgcggccgtaaggatttctgtcatgagt
aaacccgtattggtggtagtggggcacggcatggtcgggcaccactttctggagcaactg
gtggaacgcagcctgcaccaacagtatcacgtggtggtgtttggcgaggaacgccatccg
gcctatgaccgggtacatttgtccgagtattttgccggtcgcagcgccgaatccctgtca
atggtcagcgagggctttttcgaacagcacgacattgaattgcgcaccggttgccaggtg
acggagattgaccgtcaacgccgctgcgtgcgcgacgcgaacggccaggaaaccccgtac
gaccggctggtgctggcgaccggttcctacccgttcgtgccgccgatgacgggcaacgat
cgccccggttgtctggtgtatcgcacgctggaggatctggacgctattgccgccgaagcg
cgcgaatcgcgcagcggcgtagtggtgggcggcggtctgctggggctggaagccgccaac
gcgctgcgccaactggggctggaaacccatgtggtggaattcgcccccagactgatggcg
gtgcaactggacgacggcggcgcgcaactgctcaagcgcaagattgaggcgctgggcctg
caggtgcacaccggcaaggaaacccgcgcgattacggcgggcgagcaggcgcgccaccgg
atgaatttcgccgacggcacggcgctggaaaccgatctggtgctgttttccgccggtatc
cgcccgcgcgatcagctggcgcgtgacgccgcgctggagatcggcgcccgcggcggcatc
gtaatcgacgactattgccagacttcggatgacgctattttcgccattggcgagtgcgcg
ctatggcagggacagatgttcgggctggtggcgccgggttatcagatggcgcgcaccgtt
gccgcccggctggcgcaacaggagcagtcgttcaccggcgccgacatgagcaccaagctt
aagctgctgggggtggacgtggcgtcgatcggcgatgctcacggtaaaaccgagggcagc
ctgagctatcagtggaacgacgaaccgaatcaggtctataaaaaaatcattgtttcggcg
gacggcaaacggctgctgggggcggtgctggtgggcgacagcagcgattacagcacgctg
ttgcagatgaaactcaacgacatgaccttacctgcgcacccggaaagcctgattctgccg
gcgctggacggcgcggcgccgaaagggctgggggtggcggcgttgccggacagcgcccag
atctgctcctgccataacgtcagcaaagcggacatctgtgcggcggtggacaacggctgc
accgatctggcgtcgctcaaggcctgcaccaaggcgggcaccggctgcggcggctgcgta
ccgctgctcaagcaggtgatggagtaccagttgcagcagtcgggcatcgaggtaaaaaaa
gacatttgcgagcatttcgcctattcgcgtcaggagctgtaccacctgatccgcgtcaac
cgtatccgtagttttggcgagctgatcgcccgccacggtcatgggctgggctgtgaaatc
tgtaaaccgctggccggatcgatgctggcgtcctgctggaacgattacgtgctgaaaccc
gaacacgtaccgttgcaggataccaacgaccgtttcctggccaatatccagaaagacggc
acctactcggtagtgccgcgcattcccggcggcgagattaccccgcagggattgatcgcc
atcggtcaggtggccgaacgttatcacctgtataccaagattaccggcggccagcgggtc
gatctgttcggcgcgcggctggagcaactgcctgctatctggcaggagctgatcgacgcc
gggtttgaaaccggtcatgcctacggcaagtcgctgcgtaccgtcaaatcgtgcgtcggc
tccacctggtgccgctacggcgtgcaggattccacctcgctggcgattgcgctggagcac
cgttacaaagggctgcgctcgccgcataagctcaagatggcggtttccggttgcacccgc
gaatgcgccgaagcgcagggcaaagacatcggcgtgatcgccaccgacaagggttggaac
ctgtatgtgtgcggcaatggcggcatgaaaccgcgtcatgccgacctgttcgccagcgat
ctggacaccgataccctgttccggctgatcgaccgcctgctgatgttctacatccgtacc
ggcgaccgcctgcagcgcaccagcgtttggctggataacctggaaggcggcatcgactac
ctgcggcaggtggtaatcgacgacagcctgggaattgccgacgagctggaaaacgagatg
cgccaggttatcgacagctatcagtgcgaatggcagaccacgctggcgcatgacgaacac
cgggcgttgttccgcgccttccttaacagcgacacgccggatgaagcggtagtgatggtg
ccggagcgcggtcagcctcgccccgcccgtctggaggagaagacgacggcggcatcagag
gcggctggcgtggaaggctggcagtgcgtcggcttcctctgcgatattccggcgaatgcc
ggcatggcggcgcgggtcggacatcagcaggtggcactgtttcatctgcctgccgcacag
ccggggcaggcgggacacgtgttcgcgctcgataatcaggagccgggcagcggcgccaac
gttctgtcgcgcggccttgtcggcgacgtggcgggcgagccggtggtgatttcgccgttg
tacaaaaagcgtctgcgtctgcgtgacggcgttagcccggatgacagccaactgcgggtg
cgcgcctggccggtgcgtgtggtacaggatcgtatctgggtggcgaacgaaccgatggcg
gtggcggcggccgacatggcggaggcgttatga
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