Dickeya fangzhongdai DSM 101947: CVE23_15005
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Entry
CVE23_15005 CDS
T05277
Name
(GenBank) fatty acid oxidation complex subunit alpha FadJ
KO
K01782
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
]
Organism
dfn
Dickeya fangzhongdai DSM 101947
Pathway
dfn00071
Fatty acid degradation
dfn00280
Valine, leucine and isoleucine degradation
dfn00310
Lysine degradation
dfn00362
Benzoate degradation
dfn00380
Tryptophan metabolism
dfn00410
beta-Alanine metabolism
dfn00640
Propanoate metabolism
dfn00650
Butanoate metabolism
dfn00907
Pinene, camphor and geraniol degradation
dfn00930
Caprolactam degradation
dfn01100
Metabolic pathways
dfn01110
Biosynthesis of secondary metabolites
dfn01120
Microbial metabolism in diverse environments
dfn01200
Carbon metabolism
dfn01212
Fatty acid metabolism
Module
dfn_M00087
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:
dfn00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
CVE23_15005
00650 Butanoate metabolism
CVE23_15005
09103 Lipid metabolism
00071 Fatty acid degradation
CVE23_15005
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
CVE23_15005
00310 Lysine degradation
CVE23_15005
00380 Tryptophan metabolism
CVE23_15005
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
CVE23_15005
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
CVE23_15005
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
CVE23_15005
00930 Caprolactam degradation
CVE23_15005
Enzymes [BR:
dfn01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
CVE23_15005
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
CVE23_15005
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
CVE23_15005
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
Tudor_FRX1
Motif
Other DBs
NCBI-ProteinID:
ATZ95173
UniProt:
A0A2K8QNT0
LinkDB
All DBs
Position
complement(3385034..3387226)
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AA seq
730 aa
AA seq
DB search
MTELNSMHQAHEHEAHAAFQLTLRPDHIGVITVDVPGEKVNTLKAEFAEQMRAVLTQARQ
HSGLQGLVILSGKPESFIAGADIGMLDACADAAAAQALAETGQETLEAIAHLPFPVVAAI
HGACLGGGLELALACDYRLCTPDDSTRLGLPEVQLGLLPGAGGTQRLPRLIGVDRALELI
LTGRQLRATQARRLGLVDEVVPHAVLLEAALGFIRRGKRQPSSPGWRHRLLMLPYVRRWL
FERVRRQTQAKTQGNYPATARILAVVRRGLEQGSQAGYQAEARAFGRLVASPESVALRRL
FFTATALKKDRGAPVEPGPLRRVGVLGGGLMGGGIAGVTALNGRLPVRIKDIHEQGITLA
LRNSWQRLSKQVERRRITPAEQRRQMSLISGGTDYRGFERVDVVVEAVFEDLALKQQMVR
ETEAVTPPHAVFATNTSSLPIHQIAAGASRPEQVIGLHYFSPVDKMPLVEVIPHAGTSEQ
TLSTTVALAKKQGKTAIVVADKAGFYVNRILAPYLNEAARCLLEGEPVESVDQALVRFGF
PVGPFTLLDEVGIDVAMKIVPVLVAELGERFCAPPALEAIARDNRKGRKNGRGFYRYDQS
RYERLCGLWRRRGKVSDGSLYPLLDVTPKAHLDPALIAQRCVMMMLNEAVRCLDEGVIRR
PGDGDIGAVMGIGFPPFLGGPFHYMNQLGIETVVGTLLSLQAQYGDRFAPAEGLLRRQSQ
LVGFADETER
NT seq
2193 nt
NT seq
+upstream
nt +downstream
nt
atgaccgagctgaattcgatgcatcaggcgcacgaacatgaggcgcacgccgctttccaa
ctgacgctacgccccgatcatatcggggtgattaccgtggatgtccccggcgagaaagtg
aataccctgaaagcggaattcgcggaacagatgcgcgcggtgctgacgcaggcccgacag
cacagtggcctgcaagggctggttatcctctccggcaagccggaatcgtttatcgccggg
gcggatatcggcatgctggatgcctgtgccgacgcggcggcggcgcaggcgctggctgaa
accgggcaggaaacgctggaggcgatcgcccatctgccgttcccggtggtggcggccatt
cacggcgcctgtctgggcggcgggctggaactggcgctggcttgcgattatcgcctctgt
acgccggacgacagtacccgtctcgggttgccggaagtgcaattagggctattgccgggc
gcaggcggcacccagcggctgccgcgtctgattggcgtggaccgcgcgctggagttgatc
ctgaccgggcggcagttgcgggcgactcaggcgcggcggctcgggttggtggatgaggtg
gtgccgcacgcggtcttgctggaggcggcgctgggctttatccgccggggtaaacgccaa
ccgtcttcgcccggctggcggcatcggttactgatgctgccttacgtacgccgctggctg
tttgagcgggtgcggcgacagacgcaggcgaaaacccagggcaattacccggcgacggcg
cgtatcctggcggtggtgcggcgtggtctggagcagggcagtcaggctggctatcaagcg
gaggctcgcgctttcggccgactggtggcgtcgccggagtccgtggcgttgcggcgactg
ttttttaccgccacggccctgaaaaaagatcggggcgcgccggtcgaacccggcccactg
cgccgggtcggggtgctgggcggtggtttgatgggcggcggcatcgccggcgtcaccgcg
ctgaacggccgattgccggtaaggattaaagatattcatgagcaaggcatcaccctcgcg
ctgcgcaacagctggcaacggttgagcaaacaggtcgagcgccgccgcatcacgcccgca
gagcagcggcggcaaatgagcctgatttccggcgggaccgattaccggggatttgagcgc
gtcgatgtggtagtggaagcggtattcgaagatttggcgctcaaacagcagatggtgcgg
gaaaccgaagcggtgacgccgccgcatgcggtgtttgccaccaatacgtcgtcgctgccg
attcatcagatcgccgccggcgccagccggcccgagcaggtgattggcctgcactatttc
agcccggtggacaagatgccgctggttgaagttattccgcatgccggaaccagcgagcag
acgttgtccaccacggtggcgctggcgaagaagcagggcaagaccgcgatcgtggtagcg
gataaagccgggttttatgttaaccgtattctggcgccttacctgaatgaagcggctcgc
tgcctgctggaaggcgaaccggtcgaatcggttgatcaggcgctggtgcgtttcggtttc
cctgtcggcccctttaccttgctggatgaggtggggattgatgtggcgatgaagattgta
ccggtactggtggcggaactgggcgagcggttttgtgcgccgccggcgctggaagccatt
gcccgcgacaatcgtaaaggccgcaagaacggccgcggcttttatcgctacgatcagtcg
cgttatgaacggttatgcggtttgtggcggcgtcggggcaaagtgtccgatggcagcctc
tatccattgctggatgtgacgcccaaagcgcatctggatccggcgctgattgcgcagcgc
tgcgtcatgatgatgctgaatgaggcggtgcgctgtctggatgaaggagtgatccgccgt
ccaggcgacggcgacatcggtgcggtgatgggaatcggatttccgccgtttctgggcggc
ccgttccactacatgaatcaattagggatagaaacggtggtgggaaccctgctgtcgttg
caggcgcagtacggcgatcggtttgcgccagcggaagggctgctccggcgacagtcgcag
ctggttggctttgctgatgaaacggagcgctga
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