Dickeya fangzhongdai DSM 101947: CVE23_16435
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Entry
CVE23_16435 CDS
T05277
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
dfn
Dickeya fangzhongdai DSM 101947
Pathway
dfn00260
Glycine, serine and threonine metabolism
dfn00460
Cyanoamino acid metabolism
dfn00630
Glyoxylate and dicarboxylate metabolism
dfn00670
One carbon pool by folate
dfn00680
Methane metabolism
dfn01100
Metabolic pathways
dfn01110
Biosynthesis of secondary metabolites
dfn01120
Microbial metabolism in diverse environments
dfn01200
Carbon metabolism
dfn01230
Biosynthesis of amino acids
dfn01240
Biosynthesis of cofactors
dfn04981
Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:
dfn00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
CVE23_16435
09102 Energy metabolism
00680 Methane metabolism
CVE23_16435
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
CVE23_16435
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
CVE23_16435
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
CVE23_16435
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
CVE23_16435
Enzymes [BR:
dfn01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
CVE23_16435
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GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
OKR_DC_1
Motif
Other DBs
NCBI-ProteinID:
ATZ95430
UniProt:
A0A2K8QRS2
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Position
complement(3677478..3678731)
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AA seq
417 aa
AA seq
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MLKREMNIADYDAELWQAMQQEVVRQEEHIELIASENYTSPRVMQAQGSQLTNKYAEGYP
GKRYYGGCEYVDVVEQLAIDRAKELFGADYANVQPHSGSQANFAVYTALLQPGDTILGMN
LAHGGHLTHGSPVNLSGKLYKVVPYGIDDSGKINYDEMAELARTHQPKMIVGGFSAYSGI
VDWAKMREIADSIGAYLFVDMAHVAGLVAAGVYPNPVPHAHIVTTTTHKTLAGPRGGLIL
AKGGDEDLYKKLNSAVFPGGQGGPLMHVIAGKAVALKEAMEPEFKTYQQQVAKNAKAMVE
VFLSRGFNVVSGGTDNHLFLLDLVSKNLTGKDADAALGRANITVNKNSVPNDPKSPFVTS
GIRIGTPAATRRGFKEAEVRELAGWICDVLDNISDEAVIERVKQKVLDICARFPVYA
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atgttaaagcgtgaaatgaacattgccgattacgatgccgagctatggcaagcaatgcag
caagaagtggtgcgtcaggaagagcacattgaactgattgcgtcagaaaactataccagt
ccacgcgtcatgcaggcccaggggtctcagctgaccaataaatacgccgaagggtatccg
ggcaaacgctactacggcggttgcgaatacgttgacgtggttgaacaactggcgatcgac
cgcgccaaggaactgtttggcgccgactacgccaacgtacagccgcactccggctctcag
gctaacttcgctgtctacaccgcgctgctgcagccgggcgacaccattctgggcatgaac
ctggcgcacggcggccacctgactcacggttcaccggtcaacctgtccggtaaactgtat
aaggtcgtgccttacggtatcgatgacagcggcaagatcaactatgacgaaatggccgag
ctggcccgcactcaccagccgaaaatgatcgtgggcggcttctccgcgtattccggcatc
gttgactgggcgaaaatgcgtgaaatcgccgacagcatcggcgcttatctgttcgtcgac
atggcgcacgtcgctggtctggtcgccgcgggcgtttatccgaacccggttccgcacgct
cacatcgtgaccaccaccacccacaaaaccctggcgggtccgcgcggcggcctgatcctg
gctaaaggcggcgacgaagatctgtacaagaaactgaactccgccgtattcccgggcggc
cagggcggcccgttgatgcacgtcatcgccggtaaagccgtggcgctgaaagaagcgatg
gagccggagttcaaaacctaccagcagcaggtagcgaaaaacgccaaagcgatggtagaa
gtgttcctgtcccgcgggttcaacgtggtgtccggcggtaccgataaccacctgttcctg
ctggatctggtcagcaaaaacctgaccggtaaagacgctgacgcggcgttgggccgcgcc
aacatcaccgtaaacaaaaacagcgtgccgaacgatccgaagagcccgttcgtgacctcc
ggtatccgtatcggtacgccggcggcaacccgtcgcggtttcaaagaagcggaagtgcgc
gaactggccggctggatctgcgatgtgctggacaacatcagcgatgaagcggttattgag
cgcgtcaaacagaaagtgctggatatctgcgcccgtttcccggtttacgcctga
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