Dickeya fangzhongdai DSM 101947: CVE23_16455
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Entry
CVE23_16455 CDS
T05277
Name
(GenBank) pectate lyase
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
dfn
Dickeya fangzhongdai DSM 101947
Pathway
dfn00040
Pentose and glucuronate interconversions
dfn01100
Metabolic pathways
dfn01120
Microbial metabolism in diverse environments
dfn02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
dfn00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
CVE23_16455
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
CVE23_16455
Enzymes [BR:
dfn01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
CVE23_16455
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GFIT
Motif
Pfam:
Pectate_lyase_4
Motif
Other DBs
NCBI-ProteinID:
ATZ95434
UniProt:
A0A2K8QPK4
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Position
3684092..3685270
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AA seq
392 aa
AA seq
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MNNTRVSSAGTKSLLAAIIATAMMTSAAHAASLQTTKATEAASTGWATQSNGTTGGAKAT
SAKIYAVKSISEFKAALNGTDTDPKIIQVTGAIDISGGKAYTSFDDQKARSQISIPSNTT
IIGIGSNGKFTNGSLVVKGVSNVILRNLYLETPVDVAPHYETGDGWNAEWDAAVIDNSDH
VWVDHVTISDGSFTDDKYTTKNGEKYVQHDGALDIKKGSDFVTISYSRFELHDKTILIGH
SDSNGSQDSGKLRVTFHNNVFDRVTERTPRVRFGSIHAYNNVYLGDVKHSVYPYLYSFGL
GTSGSILSEANSFTLSNLKSIDGKNPECSIVKAFNSKVFSDKGSLVNGSSTTNLDTCGLT
AYKPTLPYKYSAQTMTSSLASSINSNAGYGKL
NT seq
1179 nt
NT seq
+upstream
nt +downstream
nt
atgaacaacactcgtgtgtcttctgcaggaaccaaaagcctactggcagccattatcgcc
accgcgatgatgacttccgcagcccacgcagccagcctgcaaaccactaaagcgacagaa
gcggcctcaaccggctgggcaacgcagagcaacggcaccaccggcggcgccaaagcaacc
tcagccaaaatctatgcagtaaaaagcatcagcgaattcaaagcggcgctgaacggtacg
gataccgatcccaagatcatccaggtaacaggggcgattgatatcagcggcggcaaagcc
tacaccagctttgacgatcagaaggcccgcagccagatcagcattccgtccaataccacc
atcatcggtatcggcagcaacggcaagttcaccaacggttcgctggtagtgaaaggcgtc
agcaacgttattctgcgtaacctgtatctcgaaacgccggtggatgtggcgccgcattac
gaaacaggggatggttggaacgccgagtgggacgccgcggtgattgataactcagaccac
gtctgggttgaccatgtcaccatcagcgacggcagcttcaccgatgacaaatacaccacc
aaaaacggtgagaaatacgtacagcacgacggcgcgctggatatcaagaaagggtccgac
ttcgtcaccatttcttacagccgcttcgaactgcacgacaaaaccatcctgatcggccac
agcgacagcaatggctcacaggactccggcaaactgcgcgtgaccttccacaacaacgtg
ttcgaccgcgttaccgagcgtactccgcgtgtccgctttggtagcatccacgcttacaac
aacgtgtatctgggcgacgtgaagcacagcgtctacccgtatctgtacagcttcggtctc
ggcaccagcggcagcatcctgtctgaagccaactccttcacgctctccaacctgaagagc
atcgatggcaaaaacccggaatgcagcatcgtgaaagccttcaacagcaaggtattctcc
gataaaggctcgctggttaacggttcgtcaaccacgaacctggatacctgcggcctcacc
gcttacaaaccgactctgccgtacaaatattcggctcagaccatgacgagcagcctggct
agcagcatcaacagcaacgcaggctacggcaaactgtaa
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