KEGG   Dickeya fangzhongdai DSM 101947: CVE23_16565
Entry
CVE23_16565       CDS       T05277                                 
Name
(GenBank) ribonuclease III
  KO
K03685  ribonuclease III [EC:3.1.26.3]
Organism
dfn  Dickeya fangzhongdai DSM 101947
Pathway
dfn03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:dfn00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    CVE23_16565
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:dfn03019]
    CVE23_16565
   03009 Ribosome biogenesis [BR:dfn03009]
    CVE23_16565
   03036 Chromosome and associated proteins [BR:dfn03036]
    CVE23_16565
Enzymes [BR:dfn01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.26  Endoribonucleases producing 5'-phosphomonoesters
    3.1.26.3  ribonuclease III
     CVE23_16565
Messenger RNA biogenesis [BR:dfn03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     CVE23_16565
Ribosome biogenesis [BR:dfn03009]
 Eukaryotic type
  90S particles
   RNase
    CVE23_16565
 Prokaryotic type
  rRNA processing factors
   CVE23_16565
Chromosome and associated proteins [BR:dfn03036]
 Eukaryotic type
  Gene silencing
   microRNA pathway
    Microprocessor complex
     CVE23_16565
SSDB
Motif
Pfam: Ribonucleas_3_3 Ribonuclease_3 dsrm DSRM_2 RM44_endonuclase DND1_DSRM
Other DBs
NCBI-ProteinID: ATZ95454
UniProt: A0A2K8QPM1
LinkDB
Position
complement(3711624..3712304)
AA seq 226 aa
MNPILINRLQKKLGYTFQQYDLLLQALTHRSASSKHNERLEFLGDSILSFVIANALYHRF
PRVDEGDMSRMRATLVRGNTLAEIAREFELGECLRLGPGELKSGGFRRESILADTVEALI
GGVFLDSNIQTVERLILQWYQTRLDEISPGDKQKDPKTRLQEFLQGRHLPLPTYLVVQVR
GEAHDQEFTIHCQVSGFSEPVVGTGSSRRKAEQAAAEQALKKLELE
NT seq 681 nt   +upstreamnt  +downstreamnt
atgaaccccatcctgataaatcgtttacaaaaaaagctgggctatactttccaacaatat
gaccttttattgcaggcgctgactcaccgtagcgccagcagtaaacataacgaacggctg
gagttcctgggggattctatcctgagtttcgttatcgccaatgcgctgtaccaccggttt
ccgcgtgttgacgaaggcgatatgagccgaatgcgcgctacgctggtgcgcggcaatacg
ctggcggagattgcccgagagtttgaactgggcgaatgcctgcgtcttggtcccggcgaa
ttgaaaagcggcggtttccgccgtgagtcgattctggcggataccgtggaagcgttgatt
ggcggggtgtttctggacagcaatatccagaccgtcgagcggctgattctgcagtggtac
cagactcgtctggatgagattagcccaggcgacaagcaaaaagatccgaaaacccgcctg
caggaattcctgcagggacgccacctgccgttgcctacctatctggtcgtgcaggtgcgt
ggcgaggcgcacgatcaggaatttaccattcattgccaggtcagcgggtttagcgagccg
gtagtgggtaccgggtcaagtcgtcgtaaagctgaacaggctgcggcggaacaggccctg
aaaaagctggagcttgaatga

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