Dickeya fangzhongdai DSM 101947: CVE23_16765
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Entry
CVE23_16765 CDS
T05277
Symbol
mrcB
Name
(GenBank) penicillin-binding protein 1B
KO
K05365
penicillin-binding protein 1B [EC:
2.4.99.28
3.4.16.4
]
Organism
dfn
Dickeya fangzhongdai DSM 101947
Pathway
dfn00550
Peptidoglycan biosynthesis
dfn01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
dfn00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
CVE23_16765 (mrcB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
dfn01003
]
CVE23_16765 (mrcB)
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
dfn01011
]
CVE23_16765 (mrcB)
Enzymes [BR:
dfn01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.28 peptidoglycan glycosyltransferase
CVE23_16765 (mrcB)
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
CVE23_16765 (mrcB)
Glycosyltransferases [BR:
dfn01003
]
Polysaccharide
Bacterial polysaccharide (excluding LPS)
CVE23_16765 (mrcB)
Peptidoglycan biosynthesis and degradation proteins [BR:
dfn01011
]
Peptidoglycan biosynthesis and degradation
Glycosyltransferase/DD-Transpeptidase (Class A PBP)
CVE23_16765 (mrcB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transgly
PBP1_TM
UB2H
Transpeptidase
UvrB_inter
Motif
Other DBs
NCBI-ProteinID:
ATZ95485
UniProt:
A0A2K8QQX5
LinkDB
All DBs
Position
complement(3747783..3750284)
Genome browser
AA seq
833 aa
AA seq
DB search
MSRDDREPIGRKRSASRQTPPRRQATRRRRDDDYDDDYEEEYEEDYDDDEDDEEEVMSKR
PRKKRRWLGLLIRLFLIFVVVMSIYGVYLDGEIRSRIDGKVWQLPAAVYGRMVNLEPGMA
YSKKEMVNLLEGMQYREVSRITRPGEFTVQANSIEIQRRPFDFPDGKEGQIHAKMIFSSD
RLSQIQNMDNQRNFGFFRLDPKLITMLQSPNGEQRLFVQRSGFPDLLVQTLIATEDRHFY
EHDGISFYSIGRALIANLTAGRAVQGGSTLTQQLVKNLFLTNERSLWRKANEAYMALIMD
YRYSKDRILELYLNEVYLGQSGNDQIRGFPLASLYYFGRPVNELSLDQQAMLVGMVKGAS
LYNPWRNPQVTLERRNLVLKLLQNQQVIDEDLYNMLSARPLGVQPKGGVISPQPAFMQMV
RQELQQRLGDKANDLSGVKIFTTLDPVSQDAAEKAVEDGIPALRAARGVKDLESAMVIVD
RFSGEIRAMVGGSDAQFAGFNRAMQARRSVGSLAKPPTYLTALSMPDRYRLNTILADEPI
SLKQPNGTIWEPKNYDREFRGRVMLVDALANSLNVPTVNLGMAVGLDQVSDTLQKLGIPQ
NQIQAVPAMLLGAISLTPMEVAQEYQTIASGGNRASLSALRSVIAEDGKVLYQSFPQAER
AVPSQAAYLTLYGMQQVVERGTSRSLTVKFGNYHLAGKTGTTNDLRDSWFAGVDGKEVVI
TWVGRDNNGPAKLTGANGALTIYRRYLENQTPLPLMLTPPEGITTMTVDGSGNFICNGSA
GRALPVWTDNPQALCQASQQAVQQPANSPNGQPQQNQQEGGSVPDWIKQMFGQ
NT seq
2502 nt
NT seq
+upstream
nt +downstream
nt
atgtctcgggatgaccgcgaacctatcgggcgcaaacgtagtgcgtcacgacaaactccc
cctcgcaggcaagcgactcgccgtcgcagggatgatgactacgacgacgattatgaagaa
gagtacgaagaagactatgacgacgatgaggatgacgaggaagaagtcatgagcaagcgg
ccgcgtaagaagcgccgctggctggggttgctgatccggctattcctgattttcgtggtg
gtgatgtcgatttatggcgtttacctcgacggggaaattcgcagtcgtatcgacggcaaa
gtgtggcaactgccggcggcggtgtatggccgcatggtcaacctcgaaccgggcatggcc
tacagcaagaaagagatggtcaatttgctggaaggcatgcaataccgcgaggtcagccgc
attacccggccgggcgaattcacggtacaggccaacagcatcgaaatccagcgtcgtcct
ttcgactttccggacggcaaggaaggccaaatccacgccaaaatgatcttcagcagcgac
cggttgtcgcagatccagaacatggataatcagcgcaatttcggtttcttccggctcgac
ccgaaactgatcaccatgttgcagtcgccgaacggcgaacagcgactgtttgtgcagcgt
tcaggttttcccgacctgctggtgcaaacgctgatcgccaccgaagaccgccatttctac
gagcatgacggcatcagtttctactccatcggccgtgcgttgatcgccaacctgacggcg
gggcgggcggtgcagggcggcagtacgctaacccagcagctggtgaaaaacctgttcctg
accaacgaacgctcgttatggcgtaaagccaacgaagcctatatggcgttgatcatggat
taccgctacagcaaggatcgcattctggagctgtatctgaacgaggtgtatctcggtcag
agcggcaacgatcagatccgcggttttccgctggccagcctttactatttcgggcggccg
gtaaacgagctgagcctcgaccagcaggcgatgctggtggggatggtgaaaggggcgtcg
ctctataacccgtggcgcaacccgcaggtgacgctggagcgtcgtaacctggtgctgaaa
ctgctgcagaaccagcaggtcatcgacgaagatctttacaacatgctgagcgcccgtccg
ctgggggttcagccgaaaggcggggtgatcagcccgcagccggcgttcatgcagatggtg
cgccaggaactgcaacagcggttgggcgacaaggcgaacgatctgtccggggtgaaaatc
ttcactacgctggatccggtgtcgcaggatgcggcggaaaaagcggtggaagacggcatt
ccggcgctgcgcgcggcgcgcggcgtcaaggatctggaatcggcgatggtgattgtcgat
cgctttagcggcgagattcgggcgatggtgggcggttccgacgcgcagttcgccggtttc
aaccgcgccatgcaggcgcgccgttcggtcggttcgctggcgaaaccgcctacttacctg
acggcgctcagcatgccggatcgctatcgcctcaacaccattctggcggatgagccgatt
tcgctcaaacagccgaacggtacgatttgggaaccgaaaaactacgatcgcgaattccgc
ggtcgggtgatgctggtggacgcgctggcgaactcgctcaacgtgccgacggtcaatctg
gggatggcggtcggtctggatcaggtcagcgatacattgcagaagctggggatcccgcag
aaccagattcaggcggtgccggcgatgttgctcggcgccatcagcctgacgccgatggaa
gtggcgcaggaataccagactatcgccagcggcggtaaccgcgcgtcgctctctgcgcta
cgttcggtgatcgccgaagacggcaaagtgctgtatcagagcttcccgcaggctgaacgg
gccgtgccgtcacaggccgcctacctgacgctgtacggtatgcaacaggtggtggaacgc
ggcacctcgcgttcgctgacggtgaaattcggtaattaccacctggcggggaaaaccggt
accaccaacgacctgcgcgacagctggtttgccggcgtcgacggcaaggaagtggtgatc
acctgggttggccgagacaacaatggcccggcgaaactgaccggcgccaacggcgcgctg
actatttatcgccgctatctggaaaaccagacgccgttgccgctgatgctgacgccgccg
gaaggcattaccaccatgacggtggacggcagcggcaactttatctgtaacggcagcgcc
ggtcgggcattgccggtgtggacggataacccgcaggcgttgtgccaggccagccagcaa
gcggtgcagcagccggccaattcgccgaacggtcagccacaacaaaatcagcaggaaggc
ggcagcgttcccgactggattaagcagatgttcgggcagtaa
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