Dickeya fangzhongdai DSM 101947: CVE23_16900
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Entry
CVE23_16900 CDS
T05277
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
dfn
Dickeya fangzhongdai DSM 101947
Pathway
dfn03030
DNA replication
dfn03430
Mismatch repair
dfn03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
dfn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CVE23_16900
03430 Mismatch repair
CVE23_16900
03440 Homologous recombination
CVE23_16900
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
dfn03032
]
CVE23_16900
03400 DNA repair and recombination proteins [BR:
dfn03400
]
CVE23_16900
Enzymes [BR:
dfn01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CVE23_16900
DNA replication proteins [BR:
dfn03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
CVE23_16900
DNA repair and recombination proteins [BR:
dfn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
CVE23_16900
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
DNA_pol_A_exo1
vATP-synt_AC39
Motif
Other DBs
NCBI-ProteinID:
ATZ95508
UniProt:
A0A2K8QQZ4
LinkDB
All DBs
Position
complement(3773841..3774575)
Genome browser
AA seq
244 aa
AA seq
DB search
MSTVITRQIVLDTETTGMNKLGVHYEGHKIIEIGAVEVVNRRLTGRHFHVYLKPDRLVDP
EAYNIHGISDEFLADKPTYGDVVDDFLDFIRGAELVIHNAAFDIGFMDYEFRLLKRDIPK
TETFCTITDSLLMARRLFPGKRNNLDALCDRYQIDNSKRTLHGALLDAEILAEVYLAMTG
GQTSLAFSMEGDTQQQAAQAETIQRISRPASALAVLYASDEELVAHEQRLDLIVKKGGSC
LWRN
NT seq
735 nt
NT seq
+upstream
nt +downstream
nt
atgagcactgtaattacacgacaaatcgttcttgatactgaaaccaccggtatgaataaa
ctgggggttcattatgaagggcacaagattattgagatcggtgcggtcgaggtggtgaac
cgtcgtctgaccgggcgccacttccatgtctacctcaaaccggaccggttggtggatccg
gaggcctataacattcatggcatcagtgatgaattcctggcggataagccgacttacggc
gatgtcgtcgatgattttctcgatttcatccgcggcgccgagctggtgatccataacgcg
gcgttcgatatcggctttatggactatgagtttcgcttactgaagcgcgatatcccgaaa
accgagacgttctgcaccattaccgacagcctgctgatggcgcgccggttatttcccggc
aaacgtaataacctggatgcgttgtgcgatcgttaccagatagataacagcaagcgtacg
ctgcacggcgcgttactcgatgccgaaattctggccgaagtttatctggcgatgaccggc
ggtcaaacgtcgctggccttttcgatggagggcgatacccagcagcaggcggcgcaagcg
gaaaccatccagcgcatttcacgcccggcatcggctctggcggtgttgtatgccagcgac
gaagaactggtggcgcatgagcaacgtctggatttgattgtgaaaaaaggcggcagttgc
ctgtggcgtaactga
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