Dickeya fangzhongdai DSM 101947: CVE23_17925
Help
Entry
CVE23_17925 CDS
T05277
Symbol
cpdB
Name
(GenBank) 2',3'-cyclic-nucleotide 2'-phosphodiesterase
KO
K01119
2',3'-cyclic-nucleotide 2'-phosphodiesterase / 3'-nucleotidase [EC:
3.1.4.16
3.1.3.6
]
Organism
dfn
Dickeya fangzhongdai DSM 101947
Pathway
dfn00230
Purine metabolism
dfn00240
Pyrimidine metabolism
dfn01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
dfn00001
]
09100 Metabolism
09104 Nucleotide metabolism
00230 Purine metabolism
CVE23_17925 (cpdB)
00240 Pyrimidine metabolism
CVE23_17925 (cpdB)
Enzymes [BR:
dfn01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.6 3'-nucleotidase
CVE23_17925 (cpdB)
3.1.4 Phosphoric-diester hydrolases
3.1.4.16 2',3'-cyclic-nucleotide 2'-phosphodiesterase
CVE23_17925 (cpdB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
5_nucleotid_C
Metallophos
PTase_Orf2
PGA_cap
Motif
Other DBs
NCBI-ProteinID:
ATZ95678
UniProt:
A0A2K8QRF5
LinkDB
All DBs
Position
3999814..4001763
Genome browser
AA seq
649 aa
AA seq
DB search
MKHKLVLSLLAIAIANATQAATVDLRVLETTDLHSNMMDYDYYKDSPTDKFGLVRTASLI
QAARQQAVNSVLVDNGDIIQGSPLGDYAAAKGLQKGDVHPVYLAMNTLDYAVGNIGNHEF
NYGLDYLHNALAGAHFPYINANVLDAKTGKPLFTPYLIEKKTVKDRDGKSHELRIGYIGF
VPPQIMVWDKANLSGKVTVADITETAKKWVPELRKQGADVVVAIPHSGLSAEPYKTMAEN
SVYYLSHIPGIDAIMFGHAHAVFPSKDFASIKGADIAKGTLNGVPAVMPGQWGDHLGVVD
LVLNNDSGQWKVTEGKAEARPIYDKAQKKSLAAEDPQLVNVLSDAHQKTREFVSKPIGKA
SDNMYSYLSLIQDDPTVQIVNNAQTAYVEHFIQGDPDLAELPVLSAAAPFKAGGRKNDPA
SYVEVEKGQLTFRNAADLYLYPNTLVVVKVKGEQVREWLECSAGQFNQIDAHKREPQSLI
NWEGFRTYNFDVIDGVNYQIDVTQPARYDGECQLINGNAHRIKDLTFKGKPIDPQATFLI
ATNNYRAYGEKFAGTGEKQVAFASPDENRAVLAAYISAETKKTGEVKPAADNNWRLAKIV
SDTPLDIRVETSPSPKAAAFIKEKSQYPLTLVGNDDIGFAVYRLDLQKQ
NT seq
1950 nt
NT seq
+upstream
nt +downstream
nt
atgaagcataagctggtgctgagcctgctcgcgatagccatcgctaacgccactcaggca
gccaccgtcgatttacgggtgctggaaaccaccgatcttcacagcaatatgatggactat
gactactataaagacagtccaacggataaattcggactggtccgtaccgccagcctgatt
caagccgcccgtcagcaagccgtcaacagcgtgctggtggacaacggcgacattattcag
ggcagcccgctgggcgactacgccgccgccaaagggttgcagaaaggcgacgtgcacccg
gtctatctggcgatgaacacgctggattatgcggtcggcaatatcggtaaccacgaattc
aactacgggctggactacctgcacaacgcgctggccggcgcccatttcccgtatatcaac
gccaacgtgctggacgcgaaaaccggcaaaccgctgtttaccccttacctgatcgaaaag
aaaacggtgaaagaccgcgacggcaaatcccacgagctgcgcattggttatatcggcttc
gtgccgccgcaaatcatggtgtgggacaaagctaacctaagcggcaaagttacggtagcg
gacattaccgaaaccgcgaaaaaatgggtgccggaactgcgcaaacagggggcggacgtg
gtggttgccataccgcattccggcctgtcggcggagccgtacaaaacgatggcggaaaac
tcggtctactacttaagccacatccccggtattgacgccattatgttcggccacgcccac
gcggtattcccgagcaaggatttcgccagcatcaaaggcgccgatatcgcaaaaggcacg
ctgaacggcgttcccgccgtgatgcccggccagtggggcgaccatctcggcgtggtggat
ctggtactgaacaacgacagcggccagtggaaagtgaccgaaggtaaggcggaagcccgc
ccgatctacgacaaagcgcagaagaaatcgctggcggcggaagacccgcaactggtcaac
gtgctgtcggacgcccatcagaaaacccgcgagttcgtcagtaagccgatcggcaaagct
tccgacaatatgtacagctacctgtcgctgattcaggacgacccgacggtgcagattgtc
aacaacgcgcagaccgcgtacgtcgagcactttattcagggcgacccggatttagccgaa
ctgccggtgctgtcggcggcggcgccgttcaaagcgggcggccgcaagaacgacccggcc
agctacgtggaagtggaaaaaggccagttgaccttccgtaacgccgccgacctctatctc
taccccaacacgctggtagtggtaaaagttaaaggcgagcaggtacgggaatggctggaa
tgctccgccggtcagttcaaccagattgacgcgcacaaacgcgagccgcagtcgctcatc
aactgggaaggctttcgcacctacaactttgacgttattgacggcgtgaattatcagatc
gacgtcacccagcccgcccgctacgacggcgagtgccagttgatcaacggcaatgcgcat
cgcatcaaggatctgaccttcaaaggcaaacccatcgatccgcaggccacgttcctgatc
gccaccaacaactaccgcgcctacggcgagaaattcgccggcaccggcgaaaaacaggtc
gcgttcgcctcgccggatgaaaaccgcgcggtgctggccgcctatatcagcgccgaaacg
aaaaaaaccggcgaggtaaaaccggccgcggacaacaactggcgtctggcaaaaattgtc
agtgataccccgctggatatccgggtggaaacatcgccgtcgccgaaagcggctgccttc
atcaaggaaaaatcgcagtacccgctaacgctggtaggtaacgacgacatcggctttgcc
gtctaccgtctggacctgcaaaaacagtaa
DBGET
integrated database retrieval system
